Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KDM3AQ9Y4C1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 DUSP8P3-201ENST00000399571 1760 ntBASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.15■■□□□ 1.62
KDM3AQ9Y4C1 ZNRF2P3-201ENST00000424200 374 ntBASIC25.14■■□□□ 1.62
KDM3AQ9Y4C1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
KDM3AQ9Y4C1 C17orf82-201ENST00000623772 1530 ntBASIC25.14■■□□□ 1.62
KDM3AQ9Y4C1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
KDM3AQ9Y4C1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.14■■□□□ 1.61
KDM3AQ9Y4C1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
KDM3AQ9Y4C1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
KDM3AQ9Y4C1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
KDM3AQ9Y4C1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
KDM3AQ9Y4C1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
KDM3AQ9Y4C1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
KDM3AQ9Y4C1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.13■■□□□ 1.61
KDM3AQ9Y4C1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.13■■□□□ 1.61
KDM3AQ9Y4C1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
KDM3AQ9Y4C1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.13■■□□□ 1.61
KDM3AQ9Y4C1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KDM3AQ9Y4C1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
KDM3AQ9Y4C1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KDM3AQ9Y4C1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
KDM3AQ9Y4C1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
KDM3AQ9Y4C1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KDM3AQ9Y4C1 SYT6-210ENST00000641643 1587 ntBASIC25.12■■□□□ 1.61
KDM3AQ9Y4C1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KDM3AQ9Y4C1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.12■■□□□ 1.61
KDM3AQ9Y4C1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.12■■□□□ 1.61
KDM3AQ9Y4C1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 FP325331.1-202ENST00000623531 1380 ntBASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.11■■□□□ 1.61
KDM3AQ9Y4C1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.1■■□□□ 1.61
KDM3AQ9Y4C1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
KDM3AQ9Y4C1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KDM3AQ9Y4C1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.1■■□□□ 1.61
KDM3AQ9Y4C1 AL136967.2-201ENST00000623968 743 ntBASIC25.1■■□□□ 1.61
KDM3AQ9Y4C1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.1■■□□□ 1.61
KDM3AQ9Y4C1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.1■■□□□ 1.61
KDM3AQ9Y4C1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 MIR939-201ENST00000401314 82 ntBASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 AL138724.1-201ENST00000606771 1088 ntBASIC25.09■■□□□ 1.61
KDM3AQ9Y4C1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 AL353803.4-201ENST00000565882 1934 ntBASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.08■■□□□ 1.61
KDM3AQ9Y4C1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.08■■□□□ 1.6
KDM3AQ9Y4C1 SERBP1P1-201ENST00000396021 1160 ntBASIC25.08■■□□□ 1.6
KDM3AQ9Y4C1 AP001330.3-201ENST00000520123 633 ntBASIC25.08■■□□□ 1.6
KDM3AQ9Y4C1 AC099791.2-201ENST00000605725 427 ntBASIC25.08■■□□□ 1.6
KDM3AQ9Y4C1 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.08■■□□□ 1.6
KDM3AQ9Y4C1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms