Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.8■□□□□ 0.92
IFT52Q9Y366 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.8■□□□□ 0.92
IFT52Q9Y366 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IFT52Q9Y366 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT52Q9Y366 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.8■□□□□ 0.92
IFT52Q9Y366 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT52Q9Y366 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.8■□□□□ 0.92
IFT52Q9Y366 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT52Q9Y366 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
IFT52Q9Y366 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT52Q9Y366 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
IFT52Q9Y366 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
IFT52Q9Y366 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
IFT52Q9Y366 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFT52Q9Y366 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
IFT52Q9Y366 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.79■□□□□ 0.92
IFT52Q9Y366 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.79■□□□□ 0.92
IFT52Q9Y366 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IFT52Q9Y366 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT52Q9Y366 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT52Q9Y366 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT52Q9Y366 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.78■□□□□ 0.92
IFT52Q9Y366 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT52Q9Y366 AC079630.1-202ENST00000618127 1840 ntBASIC20.78■□□□□ 0.92
IFT52Q9Y366 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFT52Q9Y366 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
IFT52Q9Y366 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFT52Q9Y366 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFT52Q9Y366 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.77■□□□□ 0.92
IFT52Q9Y366 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFT52Q9Y366 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IFT52Q9Y366 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.77■□□□□ 0.92
IFT52Q9Y366 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFT52Q9Y366 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
IFT52Q9Y366 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
IFT52Q9Y366 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
IFT52Q9Y366 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
IFT52Q9Y366 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
IFT52Q9Y366 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.76■□□□□ 0.91
IFT52Q9Y366 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT52Q9Y366 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
IFT52Q9Y366 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT52Q9Y366 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT52Q9Y366 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT52Q9Y366 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFT52Q9Y366 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT52Q9Y366 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT52Q9Y366 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.75■□□□□ 0.91
IFT52Q9Y366 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.75■□□□□ 0.91
IFT52Q9Y366 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT52Q9Y366 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
IFT52Q9Y366 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT52Q9Y366 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.75■□□□□ 0.91
IFT52Q9Y366 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT52Q9Y366 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT52Q9Y366 BX664725.1-201ENST00000438252 379 ntBASIC20.75■□□□□ 0.91
IFT52Q9Y366 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT52Q9Y366 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
IFT52Q9Y366 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.75■□□□□ 0.91
IFT52Q9Y366 AC021242.3-201ENST00000607598 1377 ntBASIC20.74■□□□□ 0.91
IFT52Q9Y366 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT52Q9Y366 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.74■□□□□ 0.91
IFT52Q9Y366 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
IFT52Q9Y366 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.74■□□□□ 0.91
IFT52Q9Y366 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IFT52Q9Y366 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
IFT52Q9Y366 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.74■□□□□ 0.91
IFT52Q9Y366 MIR6722-201ENST00000617286 78 ntBASIC20.74■□□□□ 0.91
IFT52Q9Y366 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.74■□□□□ 0.91
IFT52Q9Y366 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT52Q9Y366 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT52Q9Y366 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT52Q9Y366 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.74■□□□□ 0.91
IFT52Q9Y366 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT52Q9Y366 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT52Q9Y366 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
IFT52Q9Y366 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
IFT52Q9Y366 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT52Q9Y366 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
IFT52Q9Y366 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT52Q9Y366 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.73■□□□□ 0.91
IFT52Q9Y366 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT52Q9Y366 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT52Q9Y366 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
IFT52Q9Y366 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.72■□□□□ 0.91
IFT52Q9Y366 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT52Q9Y366 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT52Q9Y366 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.72■□□□□ 0.91
IFT52Q9Y366 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT52Q9Y366 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT52Q9Y366 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms