Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 DUX4L4-201ENST00000566884 1269 ntBASIC9.44□□□□□ -0.9
MACF1Q9UPN3 AC009086.3-201ENST00000623486 1008 ntBASIC9.44□□□□□ -0.9
MACF1Q9UPN3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 LBH-205ENST00000407930 756 ntTSL 2 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 AC105036.2-201ENST00000569468 176 ntBASIC9.44□□□□□ -0.9
MACF1Q9UPN3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 AC231657.2-201ENST00000624556 255 ntBASIC9.44□□□□□ -0.9
MACF1Q9UPN3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 AL359736.2-201ENST00000621992 437 ntBASIC9.43□□□□□ -0.9
MACF1Q9UPN3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 REST-206ENST00000612429 1376 ntTSL 5 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 REST-207ENST00000616975 1370 ntTSL 5 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 AC090877.2-201ENST00000558441 1738 ntBASIC9.43□□□□□ -0.9
MACF1Q9UPN3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MACF1Q9UPN3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 PRKY-204ENST00000533551 1019 ntBASIC9.42□□□□□ -0.9
MACF1Q9UPN3 AL590326.2-201ENST00000625139 305 ntBASIC9.42□□□□□ -0.9
MACF1Q9UPN3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 MIPEPP3-201ENST00000412105 444 ntBASIC9.42□□□□□ -0.9
MACF1Q9UPN3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 AC026396.1-201ENST00000419388 421 ntBASIC9.42□□□□□ -0.9
MACF1Q9UPN3 PPP1R14BP2-201ENST00000426284 444 ntBASIC9.42□□□□□ -0.9
MACF1Q9UPN3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC9.42□□□□□ -0.9
MACF1Q9UPN3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 FOXO3B-201ENST00000395675 1928 ntBASIC9.41□□□□□ -0.9
MACF1Q9UPN3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 TMPOP1-202ENST00000424642 1267 ntBASIC9.41□□□□□ -0.9
MACF1Q9UPN3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms