Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB8Q9UN66 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHB8Q9UN66 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB8Q9UN66 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHB8Q9UN66 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB8Q9UN66 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB8Q9UN66 AC126544.1-201ENST00000580842 1059 ntBASIC23.81■■□□□ 1.4
PCDHB8Q9UN66 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB8Q9UN66 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PCDHB8Q9UN66 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB8Q9UN66 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB8Q9UN66 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 IRS3P-201ENST00000223076 1006 ntBASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 AC026271.2-201ENST00000428091 497 ntBASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB8Q9UN66 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB8Q9UN66 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB8Q9UN66 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB8Q9UN66 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 ABCB10P4-201ENST00000566803 2184 ntBASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 OR2I1P-207ENST00000453522 948 ntBASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHB8Q9UN66 AC079630.1-202ENST00000618127 1840 ntBASIC23.77■■□□□ 1.4
PCDHB8Q9UN66 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB8Q9UN66 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PCDHB8Q9UN66 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PCDHB8Q9UN66 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PCDHB8Q9UN66 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB8Q9UN66 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 AC010525.1-201ENST00000585559 441 ntBASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB8Q9UN66 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB8Q9UN66 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 TSPY26P-201ENST00000476365 1326 ntBASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB8Q9UN66 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 IGHV3-19-201ENST00000521488 291 ntBASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB8Q9UN66 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB8Q9UN66 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
PCDHB8Q9UN66 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB8Q9UN66 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB8Q9UN66 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHB8Q9UN66 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms