Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 HES6-206ENST00000409574 738 ntTSL 2 BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 AC133561.4-201ENST00000566112 224 ntBASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NPC1L1Q9UHC9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 AC024257.2-201ENST00000549699 147 ntBASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
NPC1L1Q9UHC9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 AL136162.1-201ENST00000607711 1078 ntBASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 AC135279.3-201ENST00000610945 1311 ntBASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 AL031432.3-201ENST00000607698 485 ntBASIC30.28■■■□□ 2.44
NPC1L1Q9UHC9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 AC133637.1-201ENST00000624115 1537 ntBASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.27■■■□□ 2.44
NPC1L1Q9UHC9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.26■■■□□ 2.43
NPC1L1Q9UHC9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
NPC1L1Q9UHC9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
NPC1L1Q9UHC9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 NFE2L3P1-201ENST00000588207 1959 ntBASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC30.25■■■□□ 2.43
NPC1L1Q9UHC9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC30.24■■■□□ 2.43
NPC1L1Q9UHC9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.24■■■□□ 2.43
NPC1L1Q9UHC9 OR2I1P-207ENST00000453522 948 ntBASIC30.24■■■□□ 2.43
NPC1L1Q9UHC9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
NPC1L1Q9UHC9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.24■■■□□ 2.43
NPC1L1Q9UHC9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.24■■■□□ 2.43
NPC1L1Q9UHC9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.24■■■□□ 2.43
NPC1L1Q9UHC9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 MIR4767-201ENST00000582827 78 ntBASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 DUSP8P5-201ENST00000422884 1815 ntBASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
NPC1L1Q9UHC9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
NPC1L1Q9UHC9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
NPC1L1Q9UHC9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NPC1L1Q9UHC9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
NPC1L1Q9UHC9 MIR638-201ENST00000385237 100 ntBASIC30.21■■■□□ 2.43
NPC1L1Q9UHC9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.21■■■□□ 2.43
NPC1L1Q9UHC9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NPC1L1Q9UHC9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms