Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.85■■□□□ 1.73
ZFYVE28Q9HCC9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZFYVE28Q9HCC9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 AL355802.2-201ENST00000402069 882 ntBASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 AL109923.1-201ENST00000618799 583 ntBASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 TMEM191A-211ENST00000637163 1067 ntBASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZFYVE28Q9HCC9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
ZFYVE28Q9HCC9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
ZFYVE28Q9HCC9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
ZFYVE28Q9HCC9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
ZFYVE28Q9HCC9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZFYVE28Q9HCC9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
ZFYVE28Q9HCC9 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.81■■□□□ 1.72
ZFYVE28Q9HCC9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.81■■□□□ 1.72
ZFYVE28Q9HCC9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZFYVE28Q9HCC9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
ZFYVE28Q9HCC9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZFYVE28Q9HCC9 HLA-L-211ENST00000482052 1765 ntBASIC25.8■■□□□ 1.72
ZFYVE28Q9HCC9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.8■■□□□ 1.72
ZFYVE28Q9HCC9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.8■■□□□ 1.72
ZFYVE28Q9HCC9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZFYVE28Q9HCC9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.8■■□□□ 1.72
ZFYVE28Q9HCC9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZFYVE28Q9HCC9 CROCCP5-201ENST00000436658 830 ntBASIC25.79■■□□□ 1.72
ZFYVE28Q9HCC9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.79■■□□□ 1.72
ZFYVE28Q9HCC9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.79■■□□□ 1.72
ZFYVE28Q9HCC9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
ZFYVE28Q9HCC9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.79■■□□□ 1.72
ZFYVE28Q9HCC9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZFYVE28Q9HCC9 FP325331.1-202ENST00000623531 1380 ntBASIC25.79■■□□□ 1.72
ZFYVE28Q9HCC9 AP004607.4-201ENST00000530158 1459 ntBASIC25.79■■□□□ 1.72
ZFYVE28Q9HCC9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 DUX4L4-201ENST00000566884 1269 ntBASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZFYVE28Q9HCC9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 TPRG1LP1-201ENST00000598702 760 ntBASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.77■■□□□ 1.72
ZFYVE28Q9HCC9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
ZFYVE28Q9HCC9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 NCF1B-203ENST00000435988 1254 ntBASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZFYVE28Q9HCC9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZFYVE28Q9HCC9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms