Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 LINC01521-201ENST00000504184 1943 ntBASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 DUX4L29-201ENST00000425409 679 ntBASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLIRPQ9GZT3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLIRPQ9GZT3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 AC025884.2-201ENST00000553429 711 ntBASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLIRPQ9GZT3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 MIR3960-201ENST00000583311 91 ntBASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLIRPQ9GZT3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 AC087742.1-201ENST00000575880 1738 ntBASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 AC044849.2-201ENST00000606596 710 ntBASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.65■□□□□ 0.74
SLIRPQ9GZT3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLIRPQ9GZT3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.64■□□□□ 0.74
SLIRPQ9GZT3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
SLIRPQ9GZT3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
SLIRPQ9GZT3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLIRPQ9GZT3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 AP006261.1-201ENST00000584783 668 ntBASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SLIRPQ9GZT3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms