Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.57■□□□□ 0.56
SSBP3Q9BWW4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSBP3Q9BWW4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 SUDS3P1-201ENST00000505831 966 ntBASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 AC144652.1-201ENST00000609974 1624 ntBASIC18.56■□□□□ 0.56
SSBP3Q9BWW4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 AF213884.3-201ENST00000563833 479 ntBASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
SSBP3Q9BWW4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 AP001330.3-201ENST00000520123 633 ntBASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSBP3Q9BWW4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 AC027682.1-201ENST00000562846 899 ntBASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 LINC01529-204ENST00000636474 1715 ntBASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSBP3Q9BWW4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 MIR939-201ENST00000401314 82 ntBASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 AC091305.1-201ENST00000479476 895 ntBASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 DUX4L4-201ENST00000566884 1269 ntBASIC18.52■□□□□ 0.56
SSBP3Q9BWW4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SSBP3Q9BWW4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSBP3Q9BWW4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 AL136967.2-201ENST00000623968 743 ntBASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSBP3Q9BWW4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 AC008764.7-201ENST00000593779 1081 ntBASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
SSBP3Q9BWW4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms