Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBA1CQ9BQE3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBA1CQ9BQE3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.96■□□□□ 0.95
TUBA1CQ9BQE3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
TUBA1CQ9BQE3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.96■□□□□ 0.95
TUBA1CQ9BQE3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.96■□□□□ 0.95
TUBA1CQ9BQE3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.95■□□□□ 0.95
TUBA1CQ9BQE3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 AF131216.4-201ENST00000638924 1588 ntBASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 HLA-L-211ENST00000482052 1765 ntBASIC20.95■□□□□ 0.94
TUBA1CQ9BQE3 ANOS2P-203ENST00000472227 1816 ntBASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 KRT16P3-201ENST00000439127 1283 ntBASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBA1CQ9BQE3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBA1CQ9BQE3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 AC092068.2-201ENST00000590491 1708 ntBASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBA1CQ9BQE3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBA1CQ9BQE3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 AL137060.1-201ENST00000618151 2648 ntBASIC20.9■□□□□ 0.94
TUBA1CQ9BQE3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TUBA1CQ9BQE3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TUBA1CQ9BQE3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TUBA1CQ9BQE3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
TUBA1CQ9BQE3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TUBA1CQ9BQE3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.89■□□□□ 0.93
TUBA1CQ9BQE3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBA1CQ9BQE3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.89■□□□□ 0.93
TUBA1CQ9BQE3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.89■□□□□ 0.93
TUBA1CQ9BQE3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
TUBA1CQ9BQE3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TUBA1CQ9BQE3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms