Protein–RNA interactions for Protein: Q9BQ83

SLX1A, Structure-specific endonuclease subunit SLX1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1AQ9BQ83 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.7■□□□□ 0.9
SLX1AQ9BQ83 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX1AQ9BQ83 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.68■□□□□ 0.9
SLX1AQ9BQ83 AC009102.2-201ENST00000606772 1639 ntBASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 DUSP8P4-201ENST00000399538 1761 ntBASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.67■□□□□ 0.9
SLX1AQ9BQ83 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 AC145676.1-201ENST00000514988 2004 ntBASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX1AQ9BQ83 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 AC087623.3-201ENST00000607047 1098 ntBASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SLX1AQ9BQ83 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SLX1AQ9BQ83 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.64■□□□□ 0.9
SLX1AQ9BQ83 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.64■□□□□ 0.89
SLX1AQ9BQ83 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.64■□□□□ 0.89
SLX1AQ9BQ83 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.64■□□□□ 0.89
SLX1AQ9BQ83 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLX1AQ9BQ83 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLX1AQ9BQ83 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLX1AQ9BQ83 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLX1AQ9BQ83 C17orf82-201ENST00000623772 1530 ntBASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 AC008764.7-201ENST00000593779 1081 ntBASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 MIR6089-201ENST00000616698 64 ntBASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 AC241377.3-202ENST00000626088 1088 ntBASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 AC241585.3-202ENST00000628937 1088 ntBASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 AC245100.8-202ENST00000629247 1058 ntBASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX1AQ9BQ83 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms