Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LITAFQ99732 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LITAFQ99732 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.91□□□□□ -0.02
LITAFQ99732 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LITAFQ99732 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LITAFQ99732 AL162393.1-201ENST00000437852 946 ntBASIC14.91□□□□□ -0.02
LITAFQ99732 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LITAFQ99732 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LITAFQ99732 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LITAFQ99732 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.9□□□□□ -0.02
LITAFQ99732 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
LITAFQ99732 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LITAFQ99732 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC14.9□□□□□ -0.02
LITAFQ99732 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LITAFQ99732 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
LITAFQ99732 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC14.9□□□□□ -0.02
LITAFQ99732 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC14.9□□□□□ -0.02
LITAFQ99732 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LITAFQ99732 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.89□□□□□ -0.03
LITAFQ99732 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LITAFQ99732 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LITAFQ99732 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.89□□□□□ -0.03
LITAFQ99732 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LITAFQ99732 AC087742.1-201ENST00000575880 1738 ntBASIC14.89□□□□□ -0.03
LITAFQ99732 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LITAFQ99732 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.88□□□□□ -0.03
LITAFQ99732 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LITAFQ99732 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LITAFQ99732 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC14.88□□□□□ -0.03
LITAFQ99732 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LITAFQ99732 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LITAFQ99732 AC090877.2-201ENST00000558441 1738 ntBASIC14.88□□□□□ -0.03
LITAFQ99732 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
LITAFQ99732 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LITAFQ99732 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 ALDH1A3-203ENST00000557963 1670 ntBASIC14.87□□□□□ -0.03
LITAFQ99732 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.87□□□□□ -0.03
LITAFQ99732 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.87□□□□□ -0.03
LITAFQ99732 KRT18P10-201ENST00000388836 1287 ntBASIC14.87□□□□□ -0.03
LITAFQ99732 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC14.87□□□□□ -0.03
LITAFQ99732 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC14.87□□□□□ -0.03
LITAFQ99732 DUX4L11-201ENST00000611504 1267 ntBASIC14.87□□□□□ -0.03
LITAFQ99732 DUX4L12-201ENST00000614593 1267 ntBASIC14.87□□□□□ -0.03
LITAFQ99732 MOB2-207ENST00000614710 705 ntTSL 5 BASIC14.87□□□□□ -0.03
LITAFQ99732 DUX4L14-201ENST00000621227 1267 ntBASIC14.87□□□□□ -0.03
LITAFQ99732 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.87□□□□□ -0.03
LITAFQ99732 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.87□□□□□ -0.03
LITAFQ99732 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LITAFQ99732 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.86□□□□□ -0.03
LITAFQ99732 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.86□□□□□ -0.03
LITAFQ99732 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LITAFQ99732 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
LITAFQ99732 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LITAFQ99732 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LITAFQ99732 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LITAFQ99732 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC14.86□□□□□ -0.03
LITAFQ99732 HGH1-207ENST00000628266 258 ntTSL 5 BASIC14.86□□□□□ -0.03
LITAFQ99732 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LITAFQ99732 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.86□□□□□ -0.03
LITAFQ99732 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.86□□□□□ -0.03
LITAFQ99732 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LITAFQ99732 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LITAFQ99732 AL022069.1-201ENST00000568025 1636 ntBASIC14.85□□□□□ -0.03
LITAFQ99732 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LITAFQ99732 AL157384.1-201ENST00000445995 2473 ntBASIC14.85□□□□□ -0.03
LITAFQ99732 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LITAFQ99732 SMPD5-203ENST00000639008 1464 ntBASIC14.85□□□□□ -0.03
LITAFQ99732 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC14.85□□□□□ -0.03
LITAFQ99732 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LITAFQ99732 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LITAFQ99732 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.85□□□□□ -0.03
LITAFQ99732 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LITAFQ99732 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.85□□□□□ -0.03
LITAFQ99732 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms