Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.35■□□□□ 0.69
SEH1LQ96EE3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.34■□□□□ 0.69
SEH1LQ96EE3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEH1LQ96EE3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SEH1LQ96EE3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.33■□□□□ 0.69
SEH1LQ96EE3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SEH1LQ96EE3 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.33■□□□□ 0.69
SEH1LQ96EE3 AL022069.1-201ENST00000568025 1636 ntBASIC19.33■□□□□ 0.69
SEH1LQ96EE3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SEH1LQ96EE3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SEH1LQ96EE3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SEH1LQ96EE3 AC239859.2-201ENST00000444165 318 ntBASIC19.33■□□□□ 0.68
SEH1LQ96EE3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.33■□□□□ 0.68
SEH1LQ96EE3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEH1LQ96EE3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SEH1LQ96EE3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEH1LQ96EE3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEH1LQ96EE3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SEH1LQ96EE3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 BX664725.1-201ENST00000438252 379 ntBASIC19.32■□□□□ 0.68
SEH1LQ96EE3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.32■□□□□ 0.68
SEH1LQ96EE3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEH1LQ96EE3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 AL035685.1-201ENST00000636663 812 ntBASIC19.3■□□□□ 0.68
SEH1LQ96EE3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEH1LQ96EE3 AC021242.3-201ENST00000607598 1377 ntBASIC19.3■□□□□ 0.68
SEH1LQ96EE3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.29■□□□□ 0.68
SEH1LQ96EE3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 AC007375.3-201ENST00000600936 2314 ntBASIC19.28■□□□□ 0.68
SEH1LQ96EE3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEH1LQ96EE3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SEH1LQ96EE3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.27■□□□□ 0.68
SEH1LQ96EE3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms