Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
SMARCC1Q92922 AC080038.1-201ENST00000611274 1154 ntBASIC28.92■■■□□ 2.22
SMARCC1Q92922 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.91■■■□□ 2.22
SMARCC1Q92922 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SMARCC1Q92922 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
SMARCC1Q92922 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.91■■■□□ 2.22
SMARCC1Q92922 AC006015.1-201ENST00000429970 570 ntBASIC28.91■■■□□ 2.22
SMARCC1Q92922 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.91■■■□□ 2.22
SMARCC1Q92922 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC28.91■■■□□ 2.22
SMARCC1Q92922 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC28.91■■■□□ 2.22
SMARCC1Q92922 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SMARCC1Q92922 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMARCC1Q92922 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMARCC1Q92922 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMARCC1Q92922 TK2-208ENST00000545043 1120 ntTSL 2 BASIC28.9■■■□□ 2.22
SMARCC1Q92922 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.9■■■□□ 2.22
SMARCC1Q92922 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.89■■■□□ 2.22
SMARCC1Q92922 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.89■■■□□ 2.22
SMARCC1Q92922 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
SMARCC1Q92922 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
SMARCC1Q92922 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.89■■■□□ 2.22
SMARCC1Q92922 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SMARCC1Q92922 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.89■■■□□ 2.22
SMARCC1Q92922 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
SMARCC1Q92922 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC28.89■■■□□ 2.21
SMARCC1Q92922 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
SMARCC1Q92922 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.88■■■□□ 2.21
SMARCC1Q92922 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
SMARCC1Q92922 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.88■■■□□ 2.21
SMARCC1Q92922 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMARCC1Q92922 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.88■■■□□ 2.21
SMARCC1Q92922 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMARCC1Q92922 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMARCC1Q92922 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.87■■■□□ 2.21
SMARCC1Q92922 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMARCC1Q92922 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.87■■■□□ 2.21
SMARCC1Q92922 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SMARCC1Q92922 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
SMARCC1Q92922 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
SMARCC1Q92922 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
SMARCC1Q92922 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
SMARCC1Q92922 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SMARCC1Q92922 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SMARCC1Q92922 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SMARCC1Q92922 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.86■■■□□ 2.21
SMARCC1Q92922 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SMARCC1Q92922 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SMARCC1Q92922 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.86■■■□□ 2.21
SMARCC1Q92922 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SMARCC1Q92922 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
SMARCC1Q92922 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SMARCC1Q92922 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SMARCC1Q92922 KRT18P61-201ENST00000585825 1298 ntBASIC28.85■■■□□ 2.21
SMARCC1Q92922 RAP2CP1-201ENST00000605103 478 ntBASIC28.85■■■□□ 2.21
SMARCC1Q92922 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
SMARCC1Q92922 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.84■■■□□ 2.21
SMARCC1Q92922 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.84■■■□□ 2.21
SMARCC1Q92922 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC1Q92922 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC1Q92922 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC1Q92922 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.84■■■□□ 2.21
SMARCC1Q92922 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC28.84■■■□□ 2.21
SMARCC1Q92922 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC1Q92922 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC1Q92922 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
SMARCC1Q92922 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC1Q92922 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC1Q92922 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCC1Q92922 AC016769.1-201ENST00000409132 1010 ntBASIC28.83■■■□□ 2.21
SMARCC1Q92922 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
SMARCC1Q92922 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCC1Q92922 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
SMARCC1Q92922 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCC1Q92922 GALNS-213ENST00000569433 723 ntTSL 3 BASIC28.83■■■□□ 2.21
SMARCC1Q92922 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.83■■■□□ 2.21
SMARCC1Q92922 GAS2L1P2-201ENST00000436355 1356 ntBASIC28.83■■■□□ 2.21
SMARCC1Q92922 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.83■■■□□ 2.21
SMARCC1Q92922 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCC1Q92922 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SMARCC1Q92922 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC28.83■■■□□ 2.21
SMARCC1Q92922 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.2
SMARCC1Q92922 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCC1Q92922 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCC1Q92922 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCC1Q92922 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.82■■■□□ 2.2
SMARCC1Q92922 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.82■■■□□ 2.2
SMARCC1Q92922 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.82■■■□□ 2.2
SMARCC1Q92922 AC137761.2-201ENST00000561729 223 ntBASIC28.82■■■□□ 2.2
SMARCC1Q92922 AC145350.3-201ENST00000569033 163 ntBASIC28.82■■■□□ 2.2
SMARCC1Q92922 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.82■■■□□ 2.2
SMARCC1Q92922 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
SMARCC1Q92922 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCC1Q92922 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCC1Q92922 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMARCC1Q92922 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.82■■■□□ 2.2
SMARCC1Q92922 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.81■■■□□ 2.2
SMARCC1Q92922 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
SMARCC1Q92922 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMARCC1Q92922 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.81■■■□□ 2.2
SMARCC1Q92922 CDCA4P2-201ENST00000441182 718 ntBASIC28.81■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms