Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC144652.1-201ENST00000609974 1624 ntBASIC23.87■■□□□ 1.41
DDX1Q92499 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.86■■□□□ 1.41
DDX1Q92499 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
DDX1Q92499 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DDX1Q92499 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DDX1Q92499 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
DDX1Q92499 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
DDX1Q92499 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.85■■□□□ 1.41
DDX1Q92499 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.85■■□□□ 1.41
DDX1Q92499 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.85■■□□□ 1.41
DDX1Q92499 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DDX1Q92499 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX1Q92499 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX1Q92499 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX1Q92499 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX1Q92499 C1orf229-201ENST00000623686 2258 ntBASIC23.84■■□□□ 1.41
DDX1Q92499 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
DDX1Q92499 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX1Q92499 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.84■■□□□ 1.41
DDX1Q92499 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX1Q92499 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX1Q92499 AC110285.6-201ENST00000617652 491 ntBASIC23.84■■□□□ 1.41
DDX1Q92499 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DDX1Q92499 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX1Q92499 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
DDX1Q92499 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX1Q92499 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
DDX1Q92499 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX1Q92499 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX1Q92499 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX1Q92499 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.83■■□□□ 1.41
DDX1Q92499 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX1Q92499 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
DDX1Q92499 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
DDX1Q92499 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX1Q92499 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX1Q92499 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
DDX1Q92499 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX1Q92499 AC009102.2-201ENST00000606772 1639 ntBASIC23.82■■□□□ 1.4
DDX1Q92499 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX1Q92499 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX1Q92499 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.82■■□□□ 1.4
DDX1Q92499 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.82■■□□□ 1.4
DDX1Q92499 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.82■■□□□ 1.4
DDX1Q92499 RARRES2P6-201ENST00000567333 442 ntBASIC23.82■■□□□ 1.4
DDX1Q92499 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX1Q92499 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX1Q92499 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
DDX1Q92499 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
DDX1Q92499 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX1Q92499 AC104564.3-201ENST00000582367 638 ntBASIC23.81■■□□□ 1.4
DDX1Q92499 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
DDX1Q92499 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.81■■□□□ 1.4
DDX1Q92499 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
DDX1Q92499 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX1Q92499 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX1Q92499 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX1Q92499 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX1Q92499 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX1Q92499 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.79■■□□□ 1.4
DDX1Q92499 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX1Q92499 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX1Q92499 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
DDX1Q92499 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX1Q92499 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DDX1Q92499 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX1Q92499 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
DDX1Q92499 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX1Q92499 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
DDX1Q92499 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
DDX1Q92499 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX1Q92499 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.78■■□□□ 1.4
DDX1Q92499 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX1Q92499 MIR6724-1-201ENST00000616420 92 ntBASIC23.78■■□□□ 1.4
DDX1Q92499 MIR6724-2-201ENST00000616483 92 ntBASIC23.78■■□□□ 1.4
DDX1Q92499 MIR6724-4-201ENST00000617390 92 ntBASIC23.78■■□□□ 1.4
DDX1Q92499 MIR6724-3-201ENST00000622482 92 ntBASIC23.78■■□□□ 1.4
DDX1Q92499 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX1Q92499 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.78■■□□□ 1.4
DDX1Q92499 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX1Q92499 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX1Q92499 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX1Q92499 FP325331.1-202ENST00000623531 1380 ntBASIC23.77■■□□□ 1.4
DDX1Q92499 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX1Q92499 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX1Q92499 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX1Q92499 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX1Q92499 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX1Q92499 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX1Q92499 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX1Q92499 AC096631.2-201ENST00000436136 790 ntBASIC23.76■■□□□ 1.39
DDX1Q92499 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX1Q92499 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
DDX1Q92499 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX1Q92499 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
DDX1Q92499 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX1Q92499 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX1Q92499 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.75■■□□□ 1.39
DDX1Q92499 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX1Q92499 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms