Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RFFLQ8WZ73 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.67■■□□□ 1.38
RFFLQ8WZ73 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFFLQ8WZ73 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFFLQ8WZ73 AC137630.3-201ENST00000607245 391 ntBASIC23.66■■□□□ 1.38
RFFLQ8WZ73 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.66■■□□□ 1.38
RFFLQ8WZ73 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.66■■□□□ 1.38
RFFLQ8WZ73 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 LINC00565-201ENST00000562710 2331 ntBASIC23.65■■□□□ 1.38
RFFLQ8WZ73 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RFFLQ8WZ73 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFFLQ8WZ73 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.64■■□□□ 1.38
RFFLQ8WZ73 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.64■■□□□ 1.38
RFFLQ8WZ73 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
RFFLQ8WZ73 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFFLQ8WZ73 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 AL356441.2-201ENST00000443009 864 ntBASIC23.64■■□□□ 1.37
RFFLQ8WZ73 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 AC127496.7-201ENST00000625110 1798 ntBASIC23.64■■□□□ 1.37
RFFLQ8WZ73 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFFLQ8WZ73 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 AC242852.2-201ENST00000615738 1807 ntBASIC23.63■■□□□ 1.37
RFFLQ8WZ73 AC144652.1-201ENST00000609974 1624 ntBASIC23.63■■□□□ 1.37
RFFLQ8WZ73 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
RFFLQ8WZ73 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RFFLQ8WZ73 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFFLQ8WZ73 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.61■■□□□ 1.37
RFFLQ8WZ73 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.61■■□□□ 1.37
RFFLQ8WZ73 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFFLQ8WZ73 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFFLQ8WZ73 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFFLQ8WZ73 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.61■■□□□ 1.37
RFFLQ8WZ73 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.61■■□□□ 1.37
RFFLQ8WZ73 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms