Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM104Q8NE00 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TMEM104Q8NE00 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TMEM104Q8NE00 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM104Q8NE00 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
TMEM104Q8NE00 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM104Q8NE00 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM104Q8NE00 AC242852.2-201ENST00000615738 1807 ntBASIC19.09■□□□□ 0.65
TMEM104Q8NE00 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 AC004987.1-201ENST00000428627 508 ntBASIC19.09■□□□□ 0.65
TMEM104Q8NE00 ATP5G2P3-201ENST00000429083 425 ntBASIC19.09■□□□□ 0.65
TMEM104Q8NE00 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 ESRRAP2-201ENST00000418437 1549 ntBASIC19.09■□□□□ 0.65
TMEM104Q8NE00 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM104Q8NE00 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM104Q8NE00 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM104Q8NE00 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.08■□□□□ 0.64
TMEM104Q8NE00 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM104Q8NE00 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 TSPY13P-201ENST00000338964 914 ntBASIC19.06■□□□□ 0.64
TMEM104Q8NE00 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 AC012354.3-201ENST00000623734 483 ntBASIC19.06■□□□□ 0.64
TMEM104Q8NE00 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TMEM104Q8NE00 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 AC010980.1-201ENST00000587192 1142 ntBASIC19.05■□□□□ 0.64
TMEM104Q8NE00 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 AC074183.2-201ENST00000623112 922 ntBASIC19.05■□□□□ 0.64
TMEM104Q8NE00 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM104Q8NE00 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM104Q8NE00 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM104Q8NE00 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM104Q8NE00 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM104Q8NE00 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM104Q8NE00 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM104Q8NE00 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM104Q8NE00 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms