Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 AL512631.2-201ENST00000604634 923 ntBASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 LINC01529-204ENST00000636474 1715 ntBASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNRF1Q8ND25 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ZNRF1Q8ND25 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 AC131281.2-201ENST00000520478 145 ntBASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 FP325331.1-202ENST00000623531 1380 ntBASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNRF1Q8ND25 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 MIR4466-201ENST00000606121 54 ntBASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF1Q8ND25 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 SRD5A1P1-201ENST00000442297 786 ntBASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNRF1Q8ND25 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ZNRF1Q8ND25 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 AC099791.2-201ENST00000605725 427 ntBASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNRF1Q8ND25 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNRF1Q8ND25 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNRF1Q8ND25 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
ZNRF1Q8ND25 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNRF1Q8ND25 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNRF1Q8ND25 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNRF1Q8ND25 DUX4L4-201ENST00000566884 1269 ntBASIC18.58■□□□□ 0.56
ZNRF1Q8ND25 AC241377.3-202ENST00000626088 1088 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms