Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 AC079630.1-202ENST00000618127 1840 ntBASIC17.59■□□□□ 0.41
TMEM116Q8NCL8 AC103724.3-201ENST00000564481 992 ntBASIC17.59■□□□□ 0.41
TMEM116Q8NCL8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM116Q8NCL8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM116Q8NCL8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TMEM116Q8NCL8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM116Q8NCL8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM116Q8NCL8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TMEM116Q8NCL8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM116Q8NCL8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM116Q8NCL8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM116Q8NCL8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 AL031848.2-201ENST00000607670 837 ntBASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM116Q8NCL8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM116Q8NCL8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TMEM116Q8NCL8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 GUSBP5-202ENST00000510805 1989 ntBASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 ESRRAP2-201ENST00000418437 1549 ntBASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TMEM116Q8NCL8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM116Q8NCL8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM116Q8NCL8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TMEM116Q8NCL8 EP400NL-214ENST00000641289 2402 ntBASIC17.52■□□□□ 0.4
TMEM116Q8NCL8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
TMEM116Q8NCL8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM116Q8NCL8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM116Q8NCL8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms