Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN22Q8N7P3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 YBX1P4-201ENST00000392794 808 ntBASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN22Q8N7P3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN22Q8N7P3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN22Q8N7P3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN22Q8N7P3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN22Q8N7P3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN22Q8N7P3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN22Q8N7P3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLDN22Q8N7P3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLDN22Q8N7P3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN22Q8N7P3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN22Q8N7P3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN22Q8N7P3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLDN22Q8N7P3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLDN22Q8N7P3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN22Q8N7P3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN22Q8N7P3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLDN22Q8N7P3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN22Q8N7P3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CLDN22Q8N7P3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.27■□□□□ 0.83
CLDN22Q8N7P3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.27■□□□□ 0.83
CLDN22Q8N7P3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN22Q8N7P3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN22Q8N7P3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 AL353803.4-201ENST00000565882 1934 ntBASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN22Q8N7P3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms