Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.1■■□□□ 1.45
VPS52Q8N1B4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.1■■□□□ 1.45
VPS52Q8N1B4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.1■■□□□ 1.45
VPS52Q8N1B4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.09■■□□□ 1.45
VPS52Q8N1B4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
VPS52Q8N1B4 AC141586.4-201ENST00000624558 1573 ntBASIC24.09■■□□□ 1.45
VPS52Q8N1B4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
VPS52Q8N1B4 LINC01124-201ENST00000409786 2117 ntBASIC24.09■■□□□ 1.45
VPS52Q8N1B4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
VPS52Q8N1B4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.09■■□□□ 1.45
VPS52Q8N1B4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.09■■□□□ 1.45
VPS52Q8N1B4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
VPS52Q8N1B4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
VPS52Q8N1B4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
VPS52Q8N1B4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.44
VPS52Q8N1B4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.08■■□□□ 1.44
VPS52Q8N1B4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
VPS52Q8N1B4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
VPS52Q8N1B4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 TSPY26P-201ENST00000476365 1326 ntBASIC24.06■■□□□ 1.44
VPS52Q8N1B4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
VPS52Q8N1B4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
VPS52Q8N1B4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS52Q8N1B4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS52Q8N1B4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.05■■□□□ 1.44
VPS52Q8N1B4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS52Q8N1B4 SLC47A1P1-202ENST00000449666 945 ntBASIC24.05■■□□□ 1.44
VPS52Q8N1B4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
VPS52Q8N1B4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS52Q8N1B4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
VPS52Q8N1B4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS52Q8N1B4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS52Q8N1B4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.03■■□□□ 1.44
VPS52Q8N1B4 AC034268.1-201ENST00000441047 882 ntBASIC24.03■■□□□ 1.44
VPS52Q8N1B4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.03■■□□□ 1.44
VPS52Q8N1B4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.03■■□□□ 1.44
VPS52Q8N1B4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.03■■□□□ 1.44
VPS52Q8N1B4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
VPS52Q8N1B4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.02■■□□□ 1.43
VPS52Q8N1B4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.01■■□□□ 1.43
VPS52Q8N1B4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms