Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RP1L1Q8IWN7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RP1L1Q8IWN7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 AP005435.1-201ENST00000529293 1178 ntBASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RP1L1Q8IWN7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 AC006015.1-201ENST00000429970 570 ntBASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 AC142086.2-201ENST00000569753 217 ntBASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 AC080038.1-201ENST00000611274 1154 ntBASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RP1L1Q8IWN7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 MIR6089-201ENST00000616698 64 ntBASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RP1L1Q8IWN7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RP1L1Q8IWN7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RP1L1Q8IWN7 KRT18P61-201ENST00000585825 1298 ntBASIC20.14■□□□□ 0.82
RP1L1Q8IWN7 AC104771.1-201ENST00000603335 964 ntBASIC20.14■□□□□ 0.82
RP1L1Q8IWN7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.14■□□□□ 0.82
RP1L1Q8IWN7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
RP1L1Q8IWN7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms