Protein–RNA interactions for Protein: Q7RTT6

SSX6, Putative protein SSX6, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX6Q7RTT6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX6Q7RTT6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX6Q7RTT6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SSX6Q7RTT6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 AC242852.2-201ENST00000615738 1807 ntBASIC19.86■□□□□ 0.77
SSX6Q7RTT6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX6Q7RTT6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX6Q7RTT6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 ESRRAP2-201ENST00000418437 1549 ntBASIC19.84■□□□□ 0.77
SSX6Q7RTT6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 AL353803.4-201ENST00000565882 1934 ntBASIC19.84■□□□□ 0.77
SSX6Q7RTT6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX6Q7RTT6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.83■□□□□ 0.77
SSX6Q7RTT6 MIR4281-201ENST00000580852 62 ntBASIC19.83■□□□□ 0.77
SSX6Q7RTT6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.83■□□□□ 0.76
SSX6Q7RTT6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
SSX6Q7RTT6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.83■□□□□ 0.76
SSX6Q7RTT6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSX6Q7RTT6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.83■□□□□ 0.76
SSX6Q7RTT6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 PVT1_1.1-201ENST00000615125 194 ntBASIC19.82■□□□□ 0.76
SSX6Q7RTT6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 AC007375.3-201ENST00000600936 2314 ntBASIC19.82■□□□□ 0.76
SSX6Q7RTT6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 AC137767.1-201ENST00000602918 1920 ntBASIC19.82■□□□□ 0.76
SSX6Q7RTT6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SSX6Q7RTT6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX6Q7RTT6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SSX6Q7RTT6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SSX6Q7RTT6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.81■□□□□ 0.76
SSX6Q7RTT6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX6Q7RTT6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SSX6Q7RTT6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX6Q7RTT6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX6Q7RTT6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SSX6Q7RTT6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.8■□□□□ 0.76
SSX6Q7RTT6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms