Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC011298.3-201ENST00000615796 283 ntBASIC21.37■■□□□ 1.01
RNF44Q7L0R7 AC106739.1-201ENST00000617035 715 ntBASIC21.37■■□□□ 1.01
RNF44Q7L0R7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 AC024257.2-201ENST00000549699 147 ntBASIC21.36■■□□□ 1.01
RNF44Q7L0R7 MIR3181-201ENST00000578512 73 ntBASIC21.36■■□□□ 1.01
RNF44Q7L0R7 pRNA.6-201ENST00000610482 90 ntBASIC21.36■■□□□ 1.01
RNF44Q7L0R7 pRNA.5-201ENST00000612139 90 ntBASIC21.36■■□□□ 1.01
RNF44Q7L0R7 pRNA.11-201ENST00000618423 90 ntBASIC21.36■■□□□ 1.01
RNF44Q7L0R7 pRNA.13-201ENST00000619112 90 ntBASIC21.36■■□□□ 1.01
RNF44Q7L0R7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RNF44Q7L0R7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 ANOS2P-203ENST00000472227 1816 ntBASIC21.35■■□□□ 1.01
RNF44Q7L0R7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF44Q7L0R7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF44Q7L0R7 MIR638-201ENST00000385237 100 ntBASIC21.34■■□□□ 1.01
RNF44Q7L0R7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RNF44Q7L0R7 PBX2P1-201ENST00000493219 1291 ntBASIC21.34■■□□□ 1.01
RNF44Q7L0R7 AC133561.4-201ENST00000566112 224 ntBASIC21.34■■□□□ 1.01
RNF44Q7L0R7 AL499627.2-201ENST00000606283 725 ntBASIC21.34■■□□□ 1.01
RNF44Q7L0R7 AC092068.2-201ENST00000590491 1708 ntBASIC21.34■■□□□ 1.01
RNF44Q7L0R7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF44Q7L0R7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF44Q7L0R7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF44Q7L0R7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF44Q7L0R7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF44Q7L0R7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
RNF44Q7L0R7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.33■■□□□ 1
RNF44Q7L0R7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.32■■□□□ 1
RNF44Q7L0R7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF44Q7L0R7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.32■■□□□ 1
RNF44Q7L0R7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.32■■□□□ 1
RNF44Q7L0R7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF44Q7L0R7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF44Q7L0R7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF44Q7L0R7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.32■■□□□ 1
RNF44Q7L0R7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.32■■□□□ 1
RNF44Q7L0R7 AC136469.2-201ENST00000623944 1028 ntBASIC21.32■■□□□ 1
RNF44Q7L0R7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF44Q7L0R7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.32■■□□□ 1
RNF44Q7L0R7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.32■■□□□ 1
RNF44Q7L0R7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.31■■□□□ 1
RNF44Q7L0R7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RNF44Q7L0R7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF44Q7L0R7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF44Q7L0R7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.31■■□□□ 1
RNF44Q7L0R7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
RNF44Q7L0R7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.31■■□□□ 1
RNF44Q7L0R7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.31■■□□□ 1
RNF44Q7L0R7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF44Q7L0R7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF44Q7L0R7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF44Q7L0R7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.31■■□□□ 1
RNF44Q7L0R7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF44Q7L0R7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RNF44Q7L0R7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
RNF44Q7L0R7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF44Q7L0R7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF44Q7L0R7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF44Q7L0R7 AL353803.4-201ENST00000565882 1934 ntBASIC21.3■■□□□ 1
RNF44Q7L0R7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF44Q7L0R7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF44Q7L0R7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF44Q7L0R7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.3■■□□□ 1
RNF44Q7L0R7 MIR4767-201ENST00000582827 78 ntBASIC21.3■■□□□ 1
RNF44Q7L0R7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF44Q7L0R7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF44Q7L0R7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms