Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRIF1Q5T3J3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
LRIF1Q5T3J3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
LRIF1Q5T3J3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LRIF1Q5T3J3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.08■□□□□ 0.96
LRIF1Q5T3J3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRIF1Q5T3J3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRIF1Q5T3J3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 AC139530.1-201ENST00000575312 1977 ntBASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 MIR4508-201ENST00000584178 70 ntBASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.07■□□□□ 0.96
LRIF1Q5T3J3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 TSPY13P-201ENST00000338964 914 ntBASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 SNX5-217ENST00000606557 1087 ntBASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
LRIF1Q5T3J3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRIF1Q5T3J3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LRIF1Q5T3J3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.05■□□□□ 0.96
LRIF1Q5T3J3 AC144652.1-201ENST00000609974 1624 ntBASIC21.05■□□□□ 0.96
LRIF1Q5T3J3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRIF1Q5T3J3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIF1Q5T3J3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRIF1Q5T3J3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRIF1Q5T3J3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRIF1Q5T3J3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRIF1Q5T3J3 AC087742.1-201ENST00000575880 1738 ntBASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRIF1Q5T3J3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms