Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM1Q5H8C1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
FREM1Q5H8C1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 AC142381.2-201ENST00000566120 298 ntBASIC19.68■□□□□ 0.74
FREM1Q5H8C1 MIR3181-201ENST00000578512 73 ntBASIC19.68■□□□□ 0.74
FREM1Q5H8C1 MIR4767-201ENST00000582827 78 ntBASIC19.68■□□□□ 0.74
FREM1Q5H8C1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 AC092068.2-201ENST00000590491 1708 ntBASIC19.68■□□□□ 0.74
FREM1Q5H8C1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM1Q5H8C1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 AC010525.1-201ENST00000585559 441 ntBASIC19.67■□□□□ 0.74
FREM1Q5H8C1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM1Q5H8C1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 MIR939-201ENST00000401314 82 ntBASIC19.66■□□□□ 0.74
FREM1Q5H8C1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 AC009086.3-201ENST00000623486 1008 ntBASIC19.66■□□□□ 0.74
FREM1Q5H8C1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 RASA4CP-201ENST00000424092 1398 ntBASIC19.66■□□□□ 0.74
FREM1Q5H8C1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.66■□□□□ 0.74
FREM1Q5H8C1 AL355001.2-201ENST00000620617 1191 ntBASIC19.66■□□□□ 0.74
FREM1Q5H8C1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 ANOS2P-203ENST00000472227 1816 ntBASIC19.65■□□□□ 0.74
FREM1Q5H8C1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
FREM1Q5H8C1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.64■□□□□ 0.74
FREM1Q5H8C1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FREM1Q5H8C1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FREM1Q5H8C1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FREM1Q5H8C1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms