Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 SUL2YLR092W 2682 nt3.69□□□□□ -1.82
RFU1Q08003 MNL1YHR204W 2391 nt3.69□□□□□ -1.82
RFU1Q08003 GCR1YPL075W 2358 nt3.69□□□□□ -1.82
RFU1Q08003 RIM4YHL024W 2142 nt3.68□□□□□ -1.82
RFU1Q08003 PTR2YKR093W 1806 nt3.68□□□□□ -1.82
RFU1Q08003 YDR056CYDR056C 618 nt3.68□□□□□ -1.82
RFU1Q08003 SPO73YER046W 432 nt3.68□□□□□ -1.82
RFU1Q08003 BNA6YFR047C 888 nt3.68□□□□□ -1.82
RFU1Q08003 IRC9YJL142C 393 nt3.68□□□□□ -1.82
RFU1Q08003 YLR364C-AYLR364C-A 123 nt3.68□□□□□ -1.82
RFU1Q08003 YPL025CYPL025C 558 nt3.68□□□□□ -1.82
RFU1Q08003 MIS1YBR084W 2928 nt3.68□□□□□ -1.82
RFU1Q08003 KDX1YKL161C 1302 nt3.68□□□□□ -1.82
RFU1Q08003 YCR023CYCR023C 1836 nt3.67□□□□□ -1.82
RFU1Q08003 GPI10YGL142C 1851 nt3.67□□□□□ -1.82
RFU1Q08003 FRA2YGL220W 363 nt3.67□□□□□ -1.82
RFU1Q08003 YNK1YKL067W 462 nt3.67□□□□□ -1.82
RFU1Q08003 IES3YLR052W 753 nt3.67□□□□□ -1.82
RFU1Q08003 YLR407WYLR407W 687 nt3.67□□□□□ -1.82
RFU1Q08003 RRN9YMR270C 1098 nt3.67□□□□□ -1.82
RFU1Q08003 REX4YOL080C 870 nt3.67□□□□□ -1.82
RFU1Q08003 YPL278CYPL278C 303 nt3.67□□□□□ -1.82
RFU1Q08003 KTR7YIL085C 1554 nt3.67□□□□□ -1.82
RFU1Q08003 VMA1YDL185W 3216 nt3.66□□□□□ -1.82
RFU1Q08003 LYS2YBR115C 4179 nt3.66□□□□□ -1.82
RFU1Q08003 RAD54YGL163C 2697 nt3.66□□□□□ -1.82
RFU1Q08003 RPL24AYGL031C 468 nt3.66□□□□□ -1.82
RFU1Q08003 tQ(UUG)CtQ(UUG)C 72 nt3.66□□□□□ -1.82
RFU1Q08003 tQ(UUG)D1tQ(UUG)D1 72 nt3.66□□□□□ -1.82
RFU1Q08003 tQ(UUG)D2tQ(UUG)D2 72 nt3.66□□□□□ -1.82
RFU1Q08003 tQ(UUG)D3tQ(UUG)D3 72 nt3.66□□□□□ -1.82
RFU1Q08003 tQ(UUG)E1tQ(UUG)E1 72 nt3.66□□□□□ -1.82
RFU1Q08003 tQ(UUG)HtQ(UUG)H 72 nt3.66□□□□□ -1.82
RFU1Q08003 tQ(UUG)LtQ(UUG)L 72 nt3.66□□□□□ -1.82
RFU1Q08003 YHR140WYHR140W 720 nt3.66□□□□□ -1.82
RFU1Q08003 ISY1YJR050W 708 nt3.66□□□□□ -1.82
RFU1Q08003 ELF1YKL160W 438 nt3.66□□□□□ -1.82
RFU1Q08003 CNB1YKL190W 528 nt3.66□□□□□ -1.82
RFU1Q08003 FMP46YKR049C 402 nt3.66□□□□□ -1.82
RFU1Q08003 PAM18YLR008C 507 nt3.66□□□□□ -1.82
RFU1Q08003 YNL217WYNL217W 981 nt3.66□□□□□ -1.82
RFU1Q08003 PHM7YOL084W 2976 nt3.66□□□□□ -1.82
RFU1Q08003 YNG1YOR064C 660 nt3.66□□□□□ -1.82
RFU1Q08003 NTH1YDR001C 2256 nt3.66□□□□□ -1.82
RFU1Q08003 RCM1YNL022C 1473 nt3.66□□□□□ -1.82
RFU1Q08003 LAS1YKR063C 1509 nt3.65□□□□□ -1.82
RFU1Q08003 IDS2YJL146W 1410 nt3.65□□□□□ -1.83
RFU1Q08003 OCA4YCR095C 1089 nt3.65□□□□□ -1.83
RFU1Q08003 RXT3YDL076C 885 nt3.65□□□□□ -1.83
RFU1Q08003 ECM34YHL043W 513 nt3.65□□□□□ -1.83
RFU1Q08003 ACP1YKL192C 378 nt3.65□□□□□ -1.83
RFU1Q08003 GTR1YML121W 933 nt3.65□□□□□ -1.83
RFU1Q08003 PMC1YGL006W 3522 nt3.65□□□□□ -1.83
RFU1Q08003 BUD5YCR038C 1929 nt3.65□□□□□ -1.83
RFU1Q08003 POL12YBL035C 2118 nt3.64□□□□□ -1.83
RFU1Q08003 YDL094CYDL094C 510 nt3.64□□□□□ -1.83
RFU1Q08003 LSB1YGR136W 726 nt3.64□□□□□ -1.83
RFU1Q08003 TOM40YMR203W 1164 nt3.64□□□□□ -1.83
RFU1Q08003 VPS68YOL129W 555 nt3.64□□□□□ -1.83
RFU1Q08003 YOR379CYOR379C 339 nt3.64□□□□□ -1.83
RFU1Q08003 YBR103C-AYBR103C-A 144 nt3.64□□□□□ -1.83
RFU1Q08003 YBR219CYBR219C 384 nt3.64□□□□□ -1.83
RFU1Q08003 RER1YCL001W 567 nt3.64□□□□□ -1.83
RFU1Q08003 TAF6YGL112C 1551 nt3.63□□□□□ -1.83
RFU1Q08003 HOYDL227C 1761 nt3.63□□□□□ -1.83
RFU1Q08003 FMP25YLR077W 1752 nt3.63□□□□□ -1.83
RFU1Q08003 CDC9YDL164C 2268 nt3.63□□□□□ -1.83
RFU1Q08003 DPB2YPR175W 2070 nt3.63□□□□□ -1.83
RFU1Q08003 MAC1YMR021C 1254 nt3.63□□□□□ -1.83
RFU1Q08003 RRP40YOL142W 723 nt3.63□□□□□ -1.83
RFU1Q08003 YOR292CYOR292C 930 nt3.63□□□□□ -1.83
RFU1Q08003 SRS2YJL092W 3525 nt3.63□□□□□ -1.83
RFU1Q08003 SWI1YPL016W 3945 nt3.63□□□□□ -1.83
RFU1Q08003 SWP82YFL049W 1872 nt3.62□□□□□ -1.83
RFU1Q08003 ABP140YOR239W 1887 nt3.62□□□□□ -1.83
RFU1Q08003 ATG2YNL242W 4779 nt3.62□□□□□ -1.83
RFU1Q08003 NUS1YDL193W 1128 nt3.62□□□□□ -1.83
RFU1Q08003 PHO13YDL236W 939 nt3.62□□□□□ -1.83
RFU1Q08003 THI13YDL244W 1023 nt3.62□□□□□ -1.83
RFU1Q08003 FMP10YER182W 735 nt3.62□□□□□ -1.83
RFU1Q08003 THI11YJR156C 1023 nt3.62□□□□□ -1.83
RFU1Q08003 NSE1YLR007W 1011 nt3.62□□□□□ -1.83
RFU1Q08003 PEP4YPL154C 1218 nt3.62□□□□□ -1.83
RFU1Q08003 snR37snR37 386 nt3.62□□□□□ -1.83
RFU1Q08003 MRE11YMR224C 2079 nt3.62□□□□□ -1.83
RFU1Q08003 LYP1YNL268W 1836 nt3.62□□□□□ -1.83
RFU1Q08003 RPG1YBR079C 2895 nt3.62□□□□□ -1.83
RFU1Q08003 PEX30YLR324W 1572 nt3.62□□□□□ -1.83
RFU1Q08003 MSN4YKL062W 1893 nt3.62□□□□□ -1.83
RFU1Q08003 YTM1YOR272W 1383 nt3.62□□□□□ -1.83
RFU1Q08003 SVF1YDR346C 1446 nt3.61□□□□□ -1.83
RFU1Q08003 SLM5YCR024C 1479 nt3.61□□□□□ -1.83
RFU1Q08003 IOC2YLR095C 2439 nt3.61□□□□□ -1.83
RFU1Q08003 RDN5-1RDN5-1 121 nt3.61□□□□□ -1.83
RFU1Q08003 YAR023CYAR023C 540 nt3.61□□□□□ -1.83
RFU1Q08003 RDN5-6RDN5-6 121 nt3.61□□□□□ -1.83
RFU1Q08003 YML031C-AYML031C-A 336 nt3.61□□□□□ -1.83
RFU1Q08003 OAZ1YPL052W 879 nt3.61□□□□□ -1.83
RFU1Q08003 TIF5YPR041W 1218 nt3.61□□□□□ -1.83
RFU1Q08003 snR3snR3 194 nt3.61□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms