Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RBM3P98179 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RBM3P98179 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.07□□□□□ -0.16
RBM3P98179 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RBM3P98179 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RBM3P98179 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RBM3P98179 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RBM3P98179 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RBM3P98179 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RBM3P98179 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RBM3P98179 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RBM3P98179 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.06□□□□□ -0.16
RBM3P98179 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RBM3P98179 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RBM3P98179 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.06□□□□□ -0.16
RBM3P98179 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RBM3P98179 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RBM3P98179 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RBM3P98179 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RBM3P98179 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.06□□□□□ -0.16
RBM3P98179 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RBM3P98179 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RBM3P98179 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.05□□□□□ -0.16
RBM3P98179 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.05□□□□□ -0.16
RBM3P98179 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RBM3P98179 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC14.05□□□□□ -0.16
RBM3P98179 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RBM3P98179 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RBM3P98179 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RBM3P98179 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RBM3P98179 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RBM3P98179 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RBM3P98179 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.05□□□□□ -0.16
RBM3P98179 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.04□□□□□ -0.16
RBM3P98179 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.04□□□□□ -0.16
RBM3P98179 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RBM3P98179 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RBM3P98179 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RBM3P98179 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.03□□□□□ -0.16
RBM3P98179 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.03□□□□□ -0.16
RBM3P98179 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.03□□□□□ -0.16
RBM3P98179 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.03□□□□□ -0.16
RBM3P98179 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.03□□□□□ -0.16
RBM3P98179 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RBM3P98179 C11orf96-202ENST00000528572 1834 ntBASIC14.03□□□□□ -0.16
RBM3P98179 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RBM3P98179 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RBM3P98179 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RBM3P98179 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.02□□□□□ -0.16
RBM3P98179 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.02□□□□□ -0.16
RBM3P98179 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RBM3P98179 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
RBM3P98179 AL359258.2-201ENST00000564063 1566 ntBASIC14.02□□□□□ -0.16
RBM3P98179 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.02□□□□□ -0.16
RBM3P98179 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RBM3P98179 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.02□□□□□ -0.17
RBM3P98179 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.02□□□□□ -0.17
RBM3P98179 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
RBM3P98179 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RBM3P98179 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RBM3P98179 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RBM3P98179 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RBM3P98179 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.02□□□□□ -0.17
RBM3P98179 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
RBM3P98179 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RBM3P98179 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms