Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.19■□□□□ 0.82
RPS4XP62701 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RPS4XP62701 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.19■□□□□ 0.82
RPS4XP62701 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RPS4XP62701 MIR6722-201ENST00000617286 78 ntBASIC20.19■□□□□ 0.82
RPS4XP62701 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.19■□□□□ 0.82
RPS4XP62701 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RPS4XP62701 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4XP62701 AL353803.4-201ENST00000565882 1934 ntBASIC20.18■□□□□ 0.82
RPS4XP62701 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4XP62701 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4XP62701 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.18■□□□□ 0.82
RPS4XP62701 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.18■□□□□ 0.82
RPS4XP62701 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4XP62701 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
RPS4XP62701 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4XP62701 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4XP62701 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.18■□□□□ 0.82
RPS4XP62701 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPS4XP62701 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS4XP62701 MTDHP2-201ENST00000601468 714 ntBASIC20.17■□□□□ 0.82
RPS4XP62701 AC010997.5-201ENST00000609182 354 ntBASIC20.17■□□□□ 0.82
RPS4XP62701 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS4XP62701 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.17■□□□□ 0.82
RPS4XP62701 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4XP62701 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4XP62701 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.16■□□□□ 0.82
RPS4XP62701 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.16■□□□□ 0.82
RPS4XP62701 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.16■□□□□ 0.82
RPS4XP62701 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.16■□□□□ 0.82
RPS4XP62701 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.16■□□□□ 0.82
RPS4XP62701 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.16■□□□□ 0.82
RPS4XP62701 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4XP62701 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4XP62701 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.16■□□□□ 0.82
RPS4XP62701 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4XP62701 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4XP62701 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4XP62701 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS4XP62701 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4XP62701 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RPS4XP62701 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4XP62701 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4XP62701 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4XP62701 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4XP62701 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RPS4XP62701 AC144652.1-201ENST00000609974 1624 ntBASIC20.14■□□□□ 0.81
RPS4XP62701 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4XP62701 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4XP62701 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4XP62701 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS4XP62701 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4XP62701 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.13■□□□□ 0.81
RPS4XP62701 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RPS4XP62701 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4XP62701 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.13■□□□□ 0.81
RPS4XP62701 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.13■□□□□ 0.81
RPS4XP62701 AC005703.6-201ENST00000623265 1329 ntBASIC20.13■□□□□ 0.81
RPS4XP62701 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4XP62701 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4XP62701 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4XP62701 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RPS4XP62701 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.13■□□□□ 0.81
RPS4XP62701 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RPS4XP62701 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4XP62701 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.13■□□□□ 0.81
RPS4XP62701 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4XP62701 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4XP62701 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4XP62701 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.12■□□□□ 0.81
RPS4XP62701 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4XP62701 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4XP62701 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RPS4XP62701 MIR6724-1-201ENST00000616420 92 ntBASIC20.12■□□□□ 0.81
RPS4XP62701 MIR6724-2-201ENST00000616483 92 ntBASIC20.12■□□□□ 0.81
RPS4XP62701 MIR6724-4-201ENST00000617390 92 ntBASIC20.12■□□□□ 0.81
RPS4XP62701 MIR6724-3-201ENST00000622482 92 ntBASIC20.12■□□□□ 0.81
RPS4XP62701 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RPS4XP62701 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.12■□□□□ 0.81
RPS4XP62701 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4XP62701 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4XP62701 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RPS4XP62701 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4XP62701 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.11■□□□□ 0.81
RPS4XP62701 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4XP62701 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.11■□□□□ 0.81
RPS4XP62701 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RPS4XP62701 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RPS4XP62701 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.11■□□□□ 0.81
RPS4XP62701 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4XP62701 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.11■□□□□ 0.81
RPS4XP62701 AC131281.2-201ENST00000520478 145 ntBASIC20.11■□□□□ 0.81
RPS4XP62701 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.11■□□□□ 0.81
RPS4XP62701 AL117332.1-201ENST00000622628 974 ntBASIC20.11■□□□□ 0.81
RPS4XP62701 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.11■□□□□ 0.81
RPS4XP62701 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RPS4XP62701 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RPS4XP62701 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4XP62701 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RPS4XP62701 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms