Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21■□□□□ 0.95
NR1H2P55055 AC103834.1-201ENST00000520383 144 ntBASIC21■□□□□ 0.95
NR1H2P55055 AC087393.1-201ENST00000582896 145 ntBASIC21■□□□□ 0.95
NR1H2P55055 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NR1H2P55055 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.99■□□□□ 0.95
NR1H2P55055 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 PVT1_1.1-201ENST00000615125 194 ntBASIC20.99■□□□□ 0.95
NR1H2P55055 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NR1H2P55055 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H2P55055 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H2P55055 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H2P55055 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H2P55055 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H2P55055 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.98■□□□□ 0.95
NR1H2P55055 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H2P55055 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H2P55055 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H2P55055 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.98■□□□□ 0.95
NR1H2P55055 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.98■□□□□ 0.95
NR1H2P55055 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NR1H2P55055 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.98■□□□□ 0.95
NR1H2P55055 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H2P55055 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H2P55055 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H2P55055 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.97■□□□□ 0.95
NR1H2P55055 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H2P55055 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H2P55055 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.97■□□□□ 0.95
NR1H2P55055 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NR1H2P55055 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
NR1H2P55055 RPS2P7-201ENST00000447334 885 ntBASIC20.97■□□□□ 0.95
NR1H2P55055 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H2P55055 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H2P55055 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H2P55055 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
NR1H2P55055 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H2P55055 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NR1H2P55055 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NR1H2P55055 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
NR1H2P55055 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.96■□□□□ 0.95
NR1H2P55055 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H2P55055 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.96■□□□□ 0.95
NR1H2P55055 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H2P55055 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H2P55055 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H2P55055 AC009299.2-201ENST00000482477 511 ntBASIC20.96■□□□□ 0.95
NR1H2P55055 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H2P55055 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H2P55055 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H2P55055 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NR1H2P55055 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NR1H2P55055 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H2P55055 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NR1H2P55055 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H2P55055 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H2P55055 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H2P55055 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H2P55055 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H2P55055 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H2P55055 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H2P55055 AL031848.2-201ENST00000607670 837 ntBASIC20.94■□□□□ 0.94
NR1H2P55055 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NR1H2P55055 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H2P55055 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
NR1H2P55055 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.94■□□□□ 0.94
NR1H2P55055 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.94■□□□□ 0.94
NR1H2P55055 AC092667.1-201ENST00000434301 2586 ntBASIC20.93■□□□□ 0.94
NR1H2P55055 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NR1H2P55055 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
NR1H2P55055 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H2P55055 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H2P55055 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H2P55055 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms