Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 MIR939-201ENST00000401314 82 ntBASIC21.22■□□□□ 0.99
CD97P48960 AL162430.1-201ENST00000480705 870 ntBASIC21.22■□□□□ 0.99
CD97P48960 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.22■□□□□ 0.99
CD97P48960 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD97P48960 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD97P48960 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CD97P48960 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD97P48960 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD97P48960 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CD97P48960 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD97P48960 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD97P48960 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD97P48960 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD97P48960 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD97P48960 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD97P48960 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD97P48960 AF213884.3-201ENST00000563833 479 ntBASIC21.21■□□□□ 0.99
CD97P48960 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.21■□□□□ 0.99
CD97P48960 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.2■□□□□ 0.98
CD97P48960 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD97P48960 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD97P48960 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD97P48960 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD97P48960 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.2■□□□□ 0.98
CD97P48960 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD97P48960 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD97P48960 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.2■□□□□ 0.98
CD97P48960 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD97P48960 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.19■□□□□ 0.98
CD97P48960 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.19■□□□□ 0.98
CD97P48960 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.19■□□□□ 0.98
CD97P48960 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.19■□□□□ 0.98
CD97P48960 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.19■□□□□ 0.98
CD97P48960 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.19■□□□□ 0.98
CD97P48960 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.19■□□□□ 0.98
CD97P48960 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD97P48960 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD97P48960 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CD97P48960 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD97P48960 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD97P48960 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD97P48960 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CD97P48960 AC087623.3-201ENST00000607047 1098 ntBASIC21.18■□□□□ 0.98
CD97P48960 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD97P48960 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CD97P48960 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD97P48960 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD97P48960 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD97P48960 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CD97P48960 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.17■□□□□ 0.98
CD97P48960 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 AC091305.1-201ENST00000479476 895 ntBASIC21.17■□□□□ 0.98
CD97P48960 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CD97P48960 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.17■□□□□ 0.98
CD97P48960 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD97P48960 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CD97P48960 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD97P48960 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CD97P48960 AP001330.3-201ENST00000520123 633 ntBASIC21.16■□□□□ 0.98
CD97P48960 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD97P48960 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.16■□□□□ 0.98
CD97P48960 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD97P48960 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
CD97P48960 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD97P48960 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD97P48960 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CD97P48960 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CD97P48960 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.16■□□□□ 0.98
CD97P48960 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD97P48960 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD97P48960 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.15■□□□□ 0.98
CD97P48960 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD97P48960 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.15■□□□□ 0.98
CD97P48960 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.14■□□□□ 0.98
CD97P48960 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD97P48960 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD97P48960 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CD97P48960 AC005703.6-201ENST00000623265 1329 ntBASIC21.14■□□□□ 0.97
CD97P48960 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD97P48960 DUX4L19-201ENST00000557448 1267 ntBASIC21.14■□□□□ 0.97
CD97P48960 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD97P48960 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CD97P48960 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD97P48960 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.14■□□□□ 0.97
CD97P48960 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD97P48960 SLC6A10P-202ENST00000431994 2058 ntBASIC21.14■□□□□ 0.97
CD97P48960 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD97P48960 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD97P48960 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD97P48960 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD97P48960 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms