Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.4■■□□□ 1.34
PCK1P35558 TSPY9P-201ENST00000440215 945 ntBASIC23.4■■□□□ 1.34
PCK1P35558 TSPY11P-201ENST00000442607 1045 ntBASIC23.4■■□□□ 1.34
PCK1P35558 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.4■■□□□ 1.34
PCK1P35558 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.4■■□□□ 1.34
PCK1P35558 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.4■■□□□ 1.34
PCK1P35558 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCK1P35558 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCK1P35558 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCK1P35558 AC144652.1-201ENST00000609974 1624 ntBASIC23.4■■□□□ 1.34
PCK1P35558 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.4■■□□□ 1.34
PCK1P35558 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PCK1P35558 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCK1P35558 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.39■■□□□ 1.34
PCK1P35558 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.39■■□□□ 1.34
PCK1P35558 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCK1P35558 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCK1P35558 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.39■■□□□ 1.33
PCK1P35558 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.39■■□□□ 1.33
PCK1P35558 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.39■■□□□ 1.33
PCK1P35558 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
PCK1P35558 AL353803.4-201ENST00000565882 1934 ntBASIC23.38■■□□□ 1.33
PCK1P35558 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCK1P35558 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCK1P35558 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
PCK1P35558 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.38■■□□□ 1.33
PCK1P35558 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCK1P35558 UNC93B8-201ENST00000511903 705 ntBASIC23.38■■□□□ 1.33
PCK1P35558 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.38■■□□□ 1.33
PCK1P35558 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCK1P35558 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCK1P35558 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCK1P35558 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.37■■□□□ 1.33
PCK1P35558 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.37■■□□□ 1.33
PCK1P35558 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.37■■□□□ 1.33
PCK1P35558 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCK1P35558 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCK1P35558 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCK1P35558 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
PCK1P35558 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.37■■□□□ 1.33
PCK1P35558 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.37■■□□□ 1.33
PCK1P35558 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCK1P35558 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCK1P35558 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PCK1P35558 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCK1P35558 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCK1P35558 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCK1P35558 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.35■■□□□ 1.33
PCK1P35558 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.35■■□□□ 1.33
PCK1P35558 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.35■■□□□ 1.33
PCK1P35558 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCK1P35558 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCK1P35558 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCK1P35558 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCK1P35558 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCK1P35558 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCK1P35558 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCK1P35558 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.34■■□□□ 1.33
PCK1P35558 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCK1P35558 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PCK1P35558 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCK1P35558 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
PCK1P35558 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCK1P35558 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PCK1P35558 FP325331.1-202ENST00000623531 1380 ntBASIC23.33■■□□□ 1.33
PCK1P35558 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCK1P35558 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCK1P35558 MIR6724-1-201ENST00000616420 92 ntBASIC23.33■■□□□ 1.33
PCK1P35558 MIR6724-2-201ENST00000616483 92 ntBASIC23.33■■□□□ 1.33
PCK1P35558 MIR6724-4-201ENST00000617390 92 ntBASIC23.33■■□□□ 1.33
PCK1P35558 MIR6724-3-201ENST00000622482 92 ntBASIC23.33■■□□□ 1.33
PCK1P35558 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.33■■□□□ 1.33
PCK1P35558 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCK1P35558 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
PCK1P35558 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCK1P35558 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.33■■□□□ 1.32
PCK1P35558 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCK1P35558 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCK1P35558 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCK1P35558 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.32■■□□□ 1.32
PCK1P35558 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCK1P35558 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.32■■□□□ 1.32
PCK1P35558 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.32■■□□□ 1.32
PCK1P35558 AC009102.2-201ENST00000606772 1639 ntBASIC23.32■■□□□ 1.32
PCK1P35558 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCK1P35558 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCK1P35558 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCK1P35558 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCK1P35558 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCK1P35558 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCK1P35558 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCK1P35558 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCK1P35558 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCK1P35558 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCK1P35558 GUSBP5-201ENST00000418136 578 ntBASIC23.31■■□□□ 1.32
PCK1P35558 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.31■■□□□ 1.32
PCK1P35558 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCK1P35558 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCK1P35558 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCK1P35558 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms