Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AC009299.2-201ENST00000482477 511 ntBASIC19.34■□□□□ 0.69
ACKR3P25106 KRT125P-201ENST00000546827 989 ntBASIC19.34■□□□□ 0.69
ACKR3P25106 AL451085.2-201ENST00000605085 799 ntBASIC19.34■□□□□ 0.69
ACKR3P25106 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ACKR3P25106 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACKR3P25106 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACKR3P25106 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACKR3P25106 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.34■□□□□ 0.69
ACKR3P25106 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACKR3P25106 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACKR3P25106 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
ACKR3P25106 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.33■□□□□ 0.69
ACKR3P25106 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ACKR3P25106 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.33■□□□□ 0.69
ACKR3P25106 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACKR3P25106 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.33■□□□□ 0.69
ACKR3P25106 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ACKR3P25106 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.33■□□□□ 0.68
ACKR3P25106 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.33■□□□□ 0.68
ACKR3P25106 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACKR3P25106 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACKR3P25106 AC005703.6-201ENST00000623265 1329 ntBASIC19.32■□□□□ 0.68
ACKR3P25106 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACKR3P25106 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ACKR3P25106 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACKR3P25106 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACKR3P25106 AL353803.4-201ENST00000565882 1934 ntBASIC19.32■□□□□ 0.68
ACKR3P25106 AC239859.2-201ENST00000444165 318 ntBASIC19.32■□□□□ 0.68
ACKR3P25106 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.32■□□□□ 0.68
ACKR3P25106 MIR4787-201ENST00000607364 84 ntBASIC19.32■□□□□ 0.68
ACKR3P25106 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACKR3P25106 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.32■□□□□ 0.68
ACKR3P25106 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.32■□□□□ 0.68
ACKR3P25106 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACKR3P25106 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACKR3P25106 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACKR3P25106 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACKR3P25106 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACKR3P25106 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ACKR3P25106 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACKR3P25106 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACKR3P25106 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACKR3P25106 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACKR3P25106 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ACKR3P25106 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ACKR3P25106 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACKR3P25106 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACKR3P25106 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.3■□□□□ 0.68
ACKR3P25106 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACKR3P25106 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.3■□□□□ 0.68
ACKR3P25106 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACKR3P25106 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ACKR3P25106 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ACKR3P25106 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACKR3P25106 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACKR3P25106 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACKR3P25106 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACKR3P25106 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACKR3P25106 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACKR3P25106 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.29■□□□□ 0.68
ACKR3P25106 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.29■□□□□ 0.68
ACKR3P25106 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.29■□□□□ 0.68
ACKR3P25106 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ACKR3P25106 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACKR3P25106 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ACKR3P25106 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.28■□□□□ 0.68
ACKR3P25106 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
ACKR3P25106 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.28■□□□□ 0.68
ACKR3P25106 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACKR3P25106 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.27■□□□□ 0.68
ACKR3P25106 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACKR3P25106 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ACKR3P25106 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ACKR3P25106 AC233723.2-201ENST00000623798 2106 ntBASIC19.27■□□□□ 0.68
ACKR3P25106 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.27■□□□□ 0.68
ACKR3P25106 AC144652.1-201ENST00000609974 1624 ntBASIC19.27■□□□□ 0.68
ACKR3P25106 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACKR3P25106 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACKR3P25106 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ACKR3P25106 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACKR3P25106 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACKR3P25106 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ACKR3P25106 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.27■□□□□ 0.67
ACKR3P25106 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ACKR3P25106 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ACKR3P25106 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACKR3P25106 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACKR3P25106 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACKR3P25106 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACKR3P25106 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACKR3P25106 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms