Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR4A1P22736 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.57■□□□□ 0.88
NR4A1P22736 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NR4A1P22736 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.57■□□□□ 0.88
NR4A1P22736 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.57■□□□□ 0.88
NR4A1P22736 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NR4A1P22736 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR4A1P22736 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NR4A1P22736 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NR4A1P22736 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NR4A1P22736 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NR4A1P22736 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NR4A1P22736 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.56■□□□□ 0.88
NR4A1P22736 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.56■□□□□ 0.88
NR4A1P22736 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.56■□□□□ 0.88
NR4A1P22736 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NR4A1P22736 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.56■□□□□ 0.88
NR4A1P22736 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NR4A1P22736 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NR4A1P22736 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NR4A1P22736 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.56■□□□□ 0.88
NR4A1P22736 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.55■□□□□ 0.88
NR4A1P22736 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR4A1P22736 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.55■□□□□ 0.88
NR4A1P22736 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR4A1P22736 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR4A1P22736 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NR4A1P22736 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR4A1P22736 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR4A1P22736 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR4A1P22736 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR4A1P22736 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.55■□□□□ 0.88
NR4A1P22736 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.55■□□□□ 0.88
NR4A1P22736 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NR4A1P22736 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.55■□□□□ 0.88
NR4A1P22736 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR4A1P22736 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR4A1P22736 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.54■□□□□ 0.88
NR4A1P22736 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.54■□□□□ 0.88
NR4A1P22736 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR4A1P22736 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NR4A1P22736 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NR4A1P22736 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR4A1P22736 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NR4A1P22736 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR4A1P22736 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.54■□□□□ 0.88
NR4A1P22736 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR4A1P22736 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR4A1P22736 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.54■□□□□ 0.88
NR4A1P22736 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NR4A1P22736 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR4A1P22736 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NR4A1P22736 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NR4A1P22736 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NR4A1P22736 RARRES2P1-201ENST00000474487 481 ntBASIC20.53■□□□□ 0.88
NR4A1P22736 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NR4A1P22736 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.53■□□□□ 0.88
NR4A1P22736 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.53■□□□□ 0.88
NR4A1P22736 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NR4A1P22736 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NR4A1P22736 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.53■□□□□ 0.88
NR4A1P22736 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NR4A1P22736 AL121603.2-201ENST00000557373 2117 ntBASIC20.53■□□□□ 0.88
NR4A1P22736 AC092068.2-201ENST00000590491 1708 ntBASIC20.53■□□□□ 0.88
NR4A1P22736 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NR4A1P22736 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NR4A1P22736 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NR4A1P22736 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.52■□□□□ 0.88
NR4A1P22736 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NR4A1P22736 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.52■□□□□ 0.88
NR4A1P22736 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NR4A1P22736 MIR4508-201ENST00000584178 70 ntBASIC20.52■□□□□ 0.88
NR4A1P22736 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NR4A1P22736 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
NR4A1P22736 KRT8P33-201ENST00000508125 1423 ntBASIC20.52■□□□□ 0.87
NR4A1P22736 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NR4A1P22736 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NR4A1P22736 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.51■□□□□ 0.87
NR4A1P22736 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NR4A1P22736 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.51■□□□□ 0.87
NR4A1P22736 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 YBX1P4-201ENST00000392794 808 ntBASIC20.51■□□□□ 0.87
NR4A1P22736 AC103834.1-201ENST00000520383 144 ntBASIC20.51■□□□□ 0.87
NR4A1P22736 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NR4A1P22736 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.5■□□□□ 0.87
NR4A1P22736 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR4A1P22736 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NR4A1P22736 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms