Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.71■□□□□ 0.91
TNFRSF1BP20333 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 AC074183.2-201ENST00000623112 922 ntBASIC20.7■□□□□ 0.9
TNFRSF1BP20333 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1BP20333 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
TNFRSF1BP20333 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 AC242852.2-201ENST00000615738 1807 ntBASIC20.68■□□□□ 0.9
TNFRSF1BP20333 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1BP20333 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 AC127496.7-201ENST00000625110 1798 ntBASIC20.67■□□□□ 0.9
TNFRSF1BP20333 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1BP20333 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 ESRRAP2-201ENST00000418437 1549 ntBASIC20.66■□□□□ 0.9
TNFRSF1BP20333 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1BP20333 AC007375.3-201ENST00000600936 2314 ntBASIC20.65■□□□□ 0.9
TNFRSF1BP20333 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1BP20333 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1BP20333 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1BP20333 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1BP20333 KRT8P33-201ENST00000508125 1423 ntBASIC20.65■□□□□ 0.9
TNFRSF1BP20333 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1BP20333 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms