Protein–RNA interactions for Protein: P18754

RCC1, Regulator of chromosome condensation, humanhuman

Predicted RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1P18754 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCC1P18754 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCC1P18754 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCC1P18754 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RCC1P18754 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCC1P18754 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCC1P18754 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCC1P18754 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCC1P18754 AC007375.3-201ENST00000600936 2314 ntBASIC18.79■□□□□ 0.6
RCC1P18754 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.79■□□□□ 0.6
RCC1P18754 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCC1P18754 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCC1P18754 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCC1P18754 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCC1P18754 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCC1P18754 YBX1P4-201ENST00000392794 808 ntBASIC18.79■□□□□ 0.6
RCC1P18754 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RCC1P18754 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCC1P18754 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCC1P18754 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RCC1P18754 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCC1P18754 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCC1P18754 AC103724.3-201ENST00000564481 992 ntBASIC18.78■□□□□ 0.6
RCC1P18754 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCC1P18754 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RCC1P18754 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCC1P18754 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.78■□□□□ 0.6
RCC1P18754 AC079630.1-202ENST00000618127 1840 ntBASIC18.77■□□□□ 0.6
RCC1P18754 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCC1P18754 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCC1P18754 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.77■□□□□ 0.6
RCC1P18754 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.77■□□□□ 0.6
RCC1P18754 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.77■□□□□ 0.6
RCC1P18754 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RCC1P18754 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.77■□□□□ 0.6
RCC1P18754 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RCC1P18754 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.77■□□□□ 0.6
RCC1P18754 AL121603.2-201ENST00000557373 2117 ntBASIC18.77■□□□□ 0.6
RCC1P18754 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RCC1P18754 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
RCC1P18754 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RCC1P18754 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RCC1P18754 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.76■□□□□ 0.59
RCC1P18754 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 LINC00526-201ENST00000581067 1875 ntBASIC18.76■□□□□ 0.59
RCC1P18754 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RCC1P18754 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.76■□□□□ 0.59
RCC1P18754 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.76■□□□□ 0.59
RCC1P18754 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RCC1P18754 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCC1P18754 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RCC1P18754 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.75■□□□□ 0.59
RCC1P18754 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCC1P18754 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.75■□□□□ 0.59
RCC1P18754 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.75■□□□□ 0.59
RCC1P18754 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCC1P18754 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCC1P18754 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCC1P18754 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.75■□□□□ 0.59
RCC1P18754 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCC1P18754 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.75■□□□□ 0.59
RCC1P18754 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCC1P18754 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCC1P18754 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCC1P18754 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RCC1P18754 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
RCC1P18754 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCC1P18754 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RCC1P18754 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.74■□□□□ 0.59
RCC1P18754 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.74■□□□□ 0.59
RCC1P18754 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCC1P18754 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.74■□□□□ 0.59
RCC1P18754 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RCC1P18754 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCC1P18754 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RCC1P18754 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RCC1P18754 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.73■□□□□ 0.59
RCC1P18754 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCC1P18754 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RCC1P18754 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCC1P18754 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCC1P18754 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RCC1P18754 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RCC1P18754 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.73■□□□□ 0.59
RCC1P18754 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.73■□□□□ 0.59
RCC1P18754 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCC1P18754 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.72■□□□□ 0.59
RCC1P18754 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCC1P18754 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCC1P18754 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCC1P18754 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.72■□□□□ 0.59
RCC1P18754 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms