Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL11A2P13942 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
COL11A2P13942 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
COL11A2P13942 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL11A2P13942 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC27.81■■■□□ 2.04
COL11A2P13942 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL11A2P13942 CDCA4P2-201ENST00000441182 718 ntBASIC27.81■■■□□ 2.04
COL11A2P13942 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.81■■■□□ 2.04
COL11A2P13942 AC137761.2-201ENST00000561729 223 ntBASIC27.81■■■□□ 2.04
COL11A2P13942 AC145350.3-201ENST00000569033 163 ntBASIC27.81■■■□□ 2.04
COL11A2P13942 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.81■■■□□ 2.04
COL11A2P13942 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL11A2P13942 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
COL11A2P13942 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL11A2P13942 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.8■■■□□ 2.04
COL11A2P13942 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.8■■■□□ 2.04
COL11A2P13942 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL11A2P13942 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
COL11A2P13942 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL11A2P13942 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
COL11A2P13942 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
COL11A2P13942 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL11A2P13942 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.79■■■□□ 2.04
COL11A2P13942 AC080038.1-201ENST00000611274 1154 ntBASIC27.79■■■□□ 2.04
COL11A2P13942 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL11A2P13942 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.79■■■□□ 2.04
COL11A2P13942 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
COL11A2P13942 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
COL11A2P13942 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.78■■■□□ 2.04
COL11A2P13942 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
COL11A2P13942 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC27.78■■■□□ 2.04
COL11A2P13942 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC27.78■■■□□ 2.04
COL11A2P13942 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
COL11A2P13942 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.78■■■□□ 2.04
COL11A2P13942 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC27.78■■■□□ 2.04
COL11A2P13942 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
COL11A2P13942 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
COL11A2P13942 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
COL11A2P13942 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
COL11A2P13942 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
COL11A2P13942 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.78■■■□□ 2.04
COL11A2P13942 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
COL11A2P13942 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.77■■■□□ 2.04
COL11A2P13942 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC27.77■■■□□ 2.04
COL11A2P13942 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.77■■■□□ 2.04
COL11A2P13942 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.77■■■□□ 2.04
COL11A2P13942 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL11A2P13942 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
COL11A2P13942 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL11A2P13942 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
COL11A2P13942 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.76■■■□□ 2.03
COL11A2P13942 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL11A2P13942 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
COL11A2P13942 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.76■■■□□ 2.03
COL11A2P13942 AC105233.4-201ENST00000642045 216 ntBASIC27.76■■■□□ 2.03
COL11A2P13942 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.75■■■□□ 2.03
COL11A2P13942 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.75■■■□□ 2.03
COL11A2P13942 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.75■■■□□ 2.03
COL11A2P13942 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.75■■■□□ 2.03
COL11A2P13942 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL11A2P13942 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL11A2P13942 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL11A2P13942 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL11A2P13942 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.75■■■□□ 2.03
COL11A2P13942 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL11A2P13942 MIR663A-201ENST00000385250 93 ntBASIC27.75■■■□□ 2.03
COL11A2P13942 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL11A2P13942 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.75■■■□□ 2.03
COL11A2P13942 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.74■■■□□ 2.03
COL11A2P13942 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.74■■■□□ 2.03
COL11A2P13942 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL11A2P13942 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
COL11A2P13942 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL11A2P13942 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.74■■■□□ 2.03
COL11A2P13942 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.74■■■□□ 2.03
COL11A2P13942 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC27.74■■■□□ 2.03
COL11A2P13942 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
COL11A2P13942 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL11A2P13942 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
COL11A2P13942 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.74■■■□□ 2.03
COL11A2P13942 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
COL11A2P13942 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
COL11A2P13942 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.73■■■□□ 2.03
COL11A2P13942 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.73■■■□□ 2.03
COL11A2P13942 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.73■■■□□ 2.03
COL11A2P13942 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL11A2P13942 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL11A2P13942 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
COL11A2P13942 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL11A2P13942 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
COL11A2P13942 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
COL11A2P13942 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms