Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMIM18P0DKX4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SMIM18P0DKX4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM18P0DKX4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM18P0DKX4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SMIM18P0DKX4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM18P0DKX4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM18P0DKX4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM18P0DKX4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.46■□□□□ 0.87
SMIM18P0DKX4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SMIM18P0DKX4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SMIM18P0DKX4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM18P0DKX4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.45■□□□□ 0.86
SMIM18P0DKX4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM18P0DKX4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM18P0DKX4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.45■□□□□ 0.86
SMIM18P0DKX4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SMIM18P0DKX4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM18P0DKX4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.45■□□□□ 0.86
SMIM18P0DKX4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.44■□□□□ 0.86
SMIM18P0DKX4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.44■□□□□ 0.86
SMIM18P0DKX4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.44■□□□□ 0.86
SMIM18P0DKX4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SMIM18P0DKX4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.44■□□□□ 0.86
SMIM18P0DKX4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
SMIM18P0DKX4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMIM18P0DKX4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
SMIM18P0DKX4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM18P0DKX4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.42■□□□□ 0.86
SMIM18P0DKX4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SMIM18P0DKX4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.42■□□□□ 0.86
SMIM18P0DKX4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.42■□□□□ 0.86
SMIM18P0DKX4 AC008813.1-201ENST00000536597 885 ntBASIC20.42■□□□□ 0.86
SMIM18P0DKX4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM18P0DKX4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 AC087742.1-201ENST00000575880 1738 ntBASIC20.4■□□□□ 0.86
SMIM18P0DKX4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM18P0DKX4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM18P0DKX4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM18P0DKX4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM18P0DKX4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.39■□□□□ 0.86
SMIM18P0DKX4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.39■□□□□ 0.85
SMIM18P0DKX4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM18P0DKX4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM18P0DKX4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.38■□□□□ 0.85
SMIM18P0DKX4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM18P0DKX4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM18P0DKX4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM18P0DKX4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM18P0DKX4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.38■□□□□ 0.85
SMIM18P0DKX4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms