Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBCP0CG48 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.51■□□□□ 0.71
UBCP0CG48 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.5■□□□□ 0.71
UBCP0CG48 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBCP0CG48 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBCP0CG48 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBCP0CG48 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.5■□□□□ 0.71
UBCP0CG48 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.5■□□□□ 0.71
UBCP0CG48 MIR4508-201ENST00000584178 70 ntBASIC19.5■□□□□ 0.71
UBCP0CG48 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBCP0CG48 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBCP0CG48 PKD1P6-201ENST00000343738 4769 ntBASIC19.5■□□□□ 0.71
UBCP0CG48 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UBCP0CG48 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBCP0CG48 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UBCP0CG48 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBCP0CG48 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UBCP0CG48 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBCP0CG48 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBCP0CG48 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBCP0CG48 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
UBCP0CG48 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBCP0CG48 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBCP0CG48 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBCP0CG48 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.49■□□□□ 0.71
UBCP0CG48 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBCP0CG48 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.49■□□□□ 0.71
UBCP0CG48 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBCP0CG48 AL353803.4-201ENST00000565882 1934 ntBASIC19.49■□□□□ 0.71
UBCP0CG48 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
UBCP0CG48 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UBCP0CG48 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.48■□□□□ 0.71
UBCP0CG48 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.48■□□□□ 0.71
UBCP0CG48 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBCP0CG48 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBCP0CG48 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
UBCP0CG48 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.48■□□□□ 0.71
UBCP0CG48 AC242852.2-201ENST00000615738 1807 ntBASIC19.48■□□□□ 0.71
UBCP0CG48 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.48■□□□□ 0.71
UBCP0CG48 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBCP0CG48 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBCP0CG48 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBCP0CG48 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.47■□□□□ 0.71
UBCP0CG48 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.47■□□□□ 0.71
UBCP0CG48 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.47■□□□□ 0.71
UBCP0CG48 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.47■□□□□ 0.71
UBCP0CG48 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
UBCP0CG48 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
UBCP0CG48 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.47■□□□□ 0.71
UBCP0CG48 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBCP0CG48 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
UBCP0CG48 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.46■□□□□ 0.71
UBCP0CG48 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.46■□□□□ 0.71
UBCP0CG48 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
UBCP0CG48 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.46■□□□□ 0.71
UBCP0CG48 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.46■□□□□ 0.71
UBCP0CG48 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBCP0CG48 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBCP0CG48 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.45■□□□□ 0.7
UBCP0CG48 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.45■□□□□ 0.7
UBCP0CG48 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.45■□□□□ 0.7
UBCP0CG48 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBCP0CG48 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.45■□□□□ 0.7
UBCP0CG48 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBCP0CG48 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.45■□□□□ 0.7
UBCP0CG48 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBCP0CG48 SNX5-217ENST00000606557 1087 ntBASIC19.45■□□□□ 0.7
UBCP0CG48 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBCP0CG48 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UBCP0CG48 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBCP0CG48 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBCP0CG48 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBCP0CG48 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBCP0CG48 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.44■□□□□ 0.7
UBCP0CG48 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.44■□□□□ 0.7
UBCP0CG48 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UBCP0CG48 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms