Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GKN3PP0CG01 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.53■□□□□ 0.88
GKN3PP0CG01 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.52■□□□□ 0.88
GKN3PP0CG01 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GKN3PP0CG01 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.52■□□□□ 0.88
GKN3PP0CG01 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GKN3PP0CG01 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.52■□□□□ 0.88
GKN3PP0CG01 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GKN3PP0CG01 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GKN3PP0CG01 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
GKN3PP0CG01 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GKN3PP0CG01 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GKN3PP0CG01 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GKN3PP0CG01 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GKN3PP0CG01 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GKN3PP0CG01 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GKN3PP0CG01 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GKN3PP0CG01 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GKN3PP0CG01 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GKN3PP0CG01 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GKN3PP0CG01 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GKN3PP0CG01 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
GKN3PP0CG01 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.51■□□□□ 0.87
GKN3PP0CG01 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GKN3PP0CG01 AC144652.1-201ENST00000609974 1624 ntBASIC20.51■□□□□ 0.87
GKN3PP0CG01 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GKN3PP0CG01 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GKN3PP0CG01 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GKN3PP0CG01 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.5■□□□□ 0.87
GKN3PP0CG01 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.5■□□□□ 0.87
GKN3PP0CG01 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GKN3PP0CG01 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GKN3PP0CG01 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GKN3PP0CG01 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GKN3PP0CG01 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.49■□□□□ 0.87
GKN3PP0CG01 AC010997.5-201ENST00000609182 354 ntBASIC20.49■□□□□ 0.87
GKN3PP0CG01 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.49■□□□□ 0.87
GKN3PP0CG01 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GKN3PP0CG01 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GKN3PP0CG01 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GKN3PP0CG01 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.48■□□□□ 0.87
GKN3PP0CG01 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GKN3PP0CG01 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.48■□□□□ 0.87
GKN3PP0CG01 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.48■□□□□ 0.87
GKN3PP0CG01 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GKN3PP0CG01 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GKN3PP0CG01 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GKN3PP0CG01 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.47■□□□□ 0.87
GKN3PP0CG01 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.47■□□□□ 0.87
GKN3PP0CG01 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
GKN3PP0CG01 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GKN3PP0CG01 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GKN3PP0CG01 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GKN3PP0CG01 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GKN3PP0CG01 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
GKN3PP0CG01 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GKN3PP0CG01 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GKN3PP0CG01 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.46■□□□□ 0.87
GKN3PP0CG01 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GKN3PP0CG01 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.46■□□□□ 0.87
GKN3PP0CG01 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.46■□□□□ 0.87
GKN3PP0CG01 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.46■□□□□ 0.87
GKN3PP0CG01 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GKN3PP0CG01 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.46■□□□□ 0.87
GKN3PP0CG01 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GKN3PP0CG01 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GKN3PP0CG01 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GKN3PP0CG01 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GKN3PP0CG01 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GKN3PP0CG01 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GKN3PP0CG01 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
GKN3PP0CG01 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
GKN3PP0CG01 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GKN3PP0CG01 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.45■□□□□ 0.86
GKN3PP0CG01 UNC93B8-201ENST00000511903 705 ntBASIC20.45■□□□□ 0.86
GKN3PP0CG01 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
GKN3PP0CG01 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.45■□□□□ 0.86
GKN3PP0CG01 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GKN3PP0CG01 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
GKN3PP0CG01 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GKN3PP0CG01 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GKN3PP0CG01 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 303.2 ms