Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CTSBP07858 MIR935-201ENST00000401179 91 ntBASIC21.27■■□□□ 1
CTSBP07858 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.27■■□□□ 1
CTSBP07858 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.27■■□□□ 1
CTSBP07858 DUX4L4-201ENST00000566884 1269 ntBASIC21.27■■□□□ 1
CTSBP07858 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CTSBP07858 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTSBP07858 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTSBP07858 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.27■■□□□ 1
CTSBP07858 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTSBP07858 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.27■■□□□ 1
CTSBP07858 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CTSBP07858 LINC01529-204ENST00000636474 1715 ntBASIC21.26■□□□□ 0.99
CTSBP07858 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTSBP07858 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.26■□□□□ 0.99
CTSBP07858 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CTSBP07858 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTSBP07858 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.26■□□□□ 0.99
CTSBP07858 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTSBP07858 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.26■□□□□ 0.99
CTSBP07858 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
CTSBP07858 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTSBP07858 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.26■□□□□ 0.99
CTSBP07858 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSBP07858 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSBP07858 FP325331.1-202ENST00000623531 1380 ntBASIC21.25■□□□□ 0.99
CTSBP07858 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.25■□□□□ 0.99
CTSBP07858 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSBP07858 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTSBP07858 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTSBP07858 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.25■□□□□ 0.99
CTSBP07858 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.25■□□□□ 0.99
CTSBP07858 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSBP07858 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.25■□□□□ 0.99
CTSBP07858 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSBP07858 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.25■□□□□ 0.99
CTSBP07858 AC133637.1-201ENST00000624115 1537 ntBASIC21.24■□□□□ 0.99
CTSBP07858 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.24■□□□□ 0.99
CTSBP07858 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.24■□□□□ 0.99
CTSBP07858 AL353803.4-201ENST00000565882 1934 ntBASIC21.24■□□□□ 0.99
CTSBP07858 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTSBP07858 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CTSBP07858 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTSBP07858 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTSBP07858 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTSBP07858 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.24■□□□□ 0.99
CTSBP07858 AC099791.1-201ENST00000416440 715 ntBASIC21.24■□□□□ 0.99
CTSBP07858 AC105265.2-201ENST00000467189 838 ntBASIC21.24■□□□□ 0.99
CTSBP07858 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTSBP07858 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.24■□□□□ 0.99
CTSBP07858 AL499627.2-201ENST00000606283 725 ntBASIC21.24■□□□□ 0.99
CTSBP07858 CA15P2-201ENST00000611168 834 ntBASIC21.24■□□□□ 0.99
CTSBP07858 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.24■□□□□ 0.99
CTSBP07858 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CTSBP07858 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTSBP07858 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.23■□□□□ 0.99
CTSBP07858 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CTSBP07858 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CTSBP07858 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.23■□□□□ 0.99
CTSBP07858 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSBP07858 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSBP07858 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CTSBP07858 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTSBP07858 AC010525.1-201ENST00000585559 441 ntBASIC21.23■□□□□ 0.99
CTSBP07858 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CTSBP07858 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSBP07858 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.23■□□□□ 0.99
CTSBP07858 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSBP07858 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSBP07858 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSBP07858 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.22■□□□□ 0.99
CTSBP07858 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTSBP07858 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.22■□□□□ 0.99
CTSBP07858 SLC47A1P1-202ENST00000449666 945 ntBASIC21.22■□□□□ 0.99
CTSBP07858 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTSBP07858 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTSBP07858 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTSBP07858 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTSBP07858 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.21■□□□□ 0.99
CTSBP07858 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSBP07858 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSBP07858 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSBP07858 ANOS2P-203ENST00000472227 1816 ntBASIC21.21■□□□□ 0.99
CTSBP07858 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSBP07858 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.21■□□□□ 0.99
CTSBP07858 AC091305.1-201ENST00000479476 895 ntBASIC21.21■□□□□ 0.99
CTSBP07858 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSBP07858 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.21■□□□□ 0.99
CTSBP07858 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSBP07858 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
CTSBP07858 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSBP07858 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSBP07858 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CTSBP07858 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CTSBP07858 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.2■□□□□ 0.98
CTSBP07858 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CTSBP07858 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSBP07858 RASA4CP-201ENST00000424092 1398 ntBASIC21.2■□□□□ 0.98
CTSBP07858 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTSBP07858 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms