Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HMGCRP04035 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.42■■□□□ 1.66
HMGCRP04035 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
HMGCRP04035 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.41■■□□□ 1.66
HMGCRP04035 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCRP04035 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCRP04035 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCRP04035 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCRP04035 AC016769.1-201ENST00000409132 1010 ntBASIC25.41■■□□□ 1.66
HMGCRP04035 CDCA4P2-201ENST00000441182 718 ntBASIC25.41■■□□□ 1.66
HMGCRP04035 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
HMGCRP04035 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
HMGCRP04035 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.41■■□□□ 1.66
HMGCRP04035 AC073111.5-205ENST00000641717 521 ntBASIC25.41■■□□□ 1.66
HMGCRP04035 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCRP04035 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.41■■□□□ 1.66
HMGCRP04035 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCRP04035 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
HMGCRP04035 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
HMGCRP04035 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HMGCRP04035 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.4■■□□□ 1.66
HMGCRP04035 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HMGCRP04035 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
HMGCRP04035 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
HMGCRP04035 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HMGCRP04035 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.39■■□□□ 1.66
HMGCRP04035 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
HMGCRP04035 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
HMGCRP04035 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HMGCRP04035 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
HMGCRP04035 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HMGCRP04035 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
HMGCRP04035 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.39■■□□□ 1.66
HMGCRP04035 AP005435.1-201ENST00000529293 1178 ntBASIC25.39■■□□□ 1.66
HMGCRP04035 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.39■■□□□ 1.66
HMGCRP04035 AC137761.2-201ENST00000561729 223 ntBASIC25.39■■□□□ 1.66
HMGCRP04035 AC145350.3-201ENST00000569033 163 ntBASIC25.39■■□□□ 1.66
HMGCRP04035 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.39■■□□□ 1.66
HMGCRP04035 KRT18P61-201ENST00000585825 1298 ntBASIC25.39■■□□□ 1.66
HMGCRP04035 AC105233.4-201ENST00000642045 216 ntBASIC25.39■■□□□ 1.66
HMGCRP04035 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.39■■□□□ 1.65
HMGCRP04035 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
HMGCRP04035 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
HMGCRP04035 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.38■■□□□ 1.65
HMGCRP04035 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
HMGCRP04035 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
HMGCRP04035 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.38■■□□□ 1.65
HMGCRP04035 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HMGCRP04035 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.38■■□□□ 1.65
HMGCRP04035 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.38■■□□□ 1.65
HMGCRP04035 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.38■■□□□ 1.65
HMGCRP04035 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HMGCRP04035 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.38■■□□□ 1.65
HMGCRP04035 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.37■■□□□ 1.65
HMGCRP04035 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HMGCRP04035 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HMGCRP04035 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.37■■□□□ 1.65
HMGCRP04035 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HMGCRP04035 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HMGCRP04035 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
HMGCRP04035 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HMGCRP04035 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.36■■□□□ 1.65
HMGCRP04035 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
HMGCRP04035 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HMGCRP04035 ABHD17AP1-201ENST00000358206 933 ntBASIC25.36■■□□□ 1.65
HMGCRP04035 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.36■■□□□ 1.65
HMGCRP04035 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HMGCRP04035 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
HMGCRP04035 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
HMGCRP04035 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
HMGCRP04035 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HMGCRP04035 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
HMGCRP04035 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.35■■□□□ 1.65
HMGCRP04035 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.35■■□□□ 1.65
HMGCRP04035 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.35■■□□□ 1.65
HMGCRP04035 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.35■■□□□ 1.65
HMGCRP04035 AC104771.1-201ENST00000603335 964 ntBASIC25.35■■□□□ 1.65
HMGCRP04035 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HMGCRP04035 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.35■■□□□ 1.65
HMGCRP04035 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.35■■□□□ 1.65
HMGCRP04035 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
HMGCRP04035 AC026185.1-201ENST00000445748 174 ntBASIC25.34■■□□□ 1.65
HMGCRP04035 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.34■■□□□ 1.65
HMGCRP04035 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.34■■□□□ 1.65
HMGCRP04035 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.34■■□□□ 1.65
HMGCRP04035 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.34■■□□□ 1.65
HMGCRP04035 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.34■■□□□ 1.65
HMGCRP04035 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HMGCRP04035 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HMGCRP04035 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HMGCRP04035 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
HMGCRP04035 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.34■■□□□ 1.65
HMGCRP04035 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.34■■□□□ 1.65
HMGCRP04035 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
HMGCRP04035 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
HMGCRP04035 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HMGCRP04035 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.33■■□□□ 1.65
HMGCRP04035 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
HMGCRP04035 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.33■■□□□ 1.65
HMGCRP04035 HLA-L-211ENST00000482052 1765 ntBASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms