Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.34■□□□□ 0.69
MT-ND4P03905 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND4P03905 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND4P03905 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
MT-ND4P03905 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND4P03905 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MT-ND4P03905 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MT-ND4P03905 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.33■□□□□ 0.69
MT-ND4P03905 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.33■□□□□ 0.69
MT-ND4P03905 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
MT-ND4P03905 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.33■□□□□ 0.69
MT-ND4P03905 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MT-ND4P03905 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND4P03905 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND4P03905 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.33■□□□□ 0.68
MT-ND4P03905 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND4P03905 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND4P03905 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.33■□□□□ 0.68
MT-ND4P03905 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.33■□□□□ 0.68
MT-ND4P03905 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND4P03905 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND4P03905 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND4P03905 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND4P03905 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.32■□□□□ 0.68
MT-ND4P03905 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.32■□□□□ 0.68
MT-ND4P03905 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND4P03905 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.32■□□□□ 0.68
MT-ND4P03905 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND4P03905 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
MT-ND4P03905 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.32■□□□□ 0.68
MT-ND4P03905 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.32■□□□□ 0.68
MT-ND4P03905 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND4P03905 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND4P03905 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND4P03905 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND4P03905 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MT-ND4P03905 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND4P03905 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND4P03905 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND4P03905 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND4P03905 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.31■□□□□ 0.68
MT-ND4P03905 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND4P03905 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND4P03905 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
MT-ND4P03905 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND4P03905 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND4P03905 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-ND4P03905 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MT-ND4P03905 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND4P03905 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MT-ND4P03905 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND4P03905 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-ND4P03905 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND4P03905 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND4P03905 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND4P03905 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND4P03905 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-ND4P03905 ABHD17AP5-201ENST00000580133 923 ntBASIC19.29■□□□□ 0.68
MT-ND4P03905 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-ND4P03905 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.29■□□□□ 0.68
MT-ND4P03905 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND4P03905 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND4P03905 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
MT-ND4P03905 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND4P03905 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND4P03905 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND4P03905 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND4P03905 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MT-ND4P03905 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MT-ND4P03905 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND4P03905 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND4P03905 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MT-ND4P03905 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MT-ND4P03905 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MT-ND4P03905 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
MT-ND4P03905 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
MT-ND4P03905 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MT-ND4P03905 ESRRAP2-201ENST00000418437 1549 ntBASIC19.27■□□□□ 0.68
MT-ND4P03905 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-ND4P03905 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-ND4P03905 NTF6A-201ENST00000591175 560 ntBASIC19.27■□□□□ 0.68
MT-ND4P03905 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MT-ND4P03905 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.27■□□□□ 0.68
MT-ND4P03905 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MT-ND4P03905 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MT-ND4P03905 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MT-ND4P03905 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND4P03905 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND4P03905 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND4P03905 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND4P03905 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms