Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.57■■□□□ 1.04
KRT6AP02538 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.57■■□□□ 1.04
KRT6AP02538 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
KRT6AP02538 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT6AP02538 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT6AP02538 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KRT6AP02538 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KRT6AP02538 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT6AP02538 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KRT6AP02538 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.56■■□□□ 1.04
KRT6AP02538 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.56■■□□□ 1.04
KRT6AP02538 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KRT6AP02538 AC144652.1-201ENST00000609974 1624 ntBASIC21.56■■□□□ 1.04
KRT6AP02538 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.56■■□□□ 1.04
KRT6AP02538 KRT125P-201ENST00000546827 989 ntBASIC21.56■■□□□ 1.04
KRT6AP02538 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT6AP02538 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT6AP02538 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT6AP02538 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KRT6AP02538 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.55■■□□□ 1.04
KRT6AP02538 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
KRT6AP02538 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.55■■□□□ 1.04
KRT6AP02538 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.55■■□□□ 1.04
KRT6AP02538 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT6AP02538 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT6AP02538 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT6AP02538 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRT6AP02538 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.54■■□□□ 1.04
KRT6AP02538 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
KRT6AP02538 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
KRT6AP02538 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.54■■□□□ 1.04
KRT6AP02538 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.54■■□□□ 1.04
KRT6AP02538 Z92544.1-202ENST00000571933 1220 ntBASIC21.54■■□□□ 1.04
KRT6AP02538 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.54■■□□□ 1.04
KRT6AP02538 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KRT6AP02538 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT6AP02538 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
KRT6AP02538 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT6AP02538 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT6AP02538 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRT6AP02538 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KRT6AP02538 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.53■■□□□ 1.04
KRT6AP02538 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
KRT6AP02538 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KRT6AP02538 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
KRT6AP02538 AC092028.1-203ENST00000608262 953 ntBASIC21.53■■□□□ 1.04
KRT6AP02538 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT6AP02538 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT6AP02538 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.53■■□□□ 1.04
KRT6AP02538 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRT6AP02538 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRT6AP02538 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.52■■□□□ 1.04
KRT6AP02538 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.52■■□□□ 1.04
KRT6AP02538 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
KRT6AP02538 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.52■■□□□ 1.04
KRT6AP02538 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.52■■□□□ 1.04
KRT6AP02538 ESRRAP2-201ENST00000418437 1549 ntBASIC21.51■■□□□ 1.03
KRT6AP02538 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT6AP02538 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT6AP02538 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT6AP02538 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT6AP02538 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KRT6AP02538 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.51■■□□□ 1.03
KRT6AP02538 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
KRT6AP02538 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT6AP02538 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT6AP02538 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT6AP02538 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.5■■□□□ 1.03
KRT6AP02538 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
KRT6AP02538 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.5■■□□□ 1.03
KRT6AP02538 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
KRT6AP02538 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
KRT6AP02538 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT6AP02538 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
KRT6AP02538 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT6AP02538 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT6AP02538 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT6AP02538 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
KRT6AP02538 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT6AP02538 RARRES2P1-201ENST00000474487 481 ntBASIC21.49■■□□□ 1.03
KRT6AP02538 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT6AP02538 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT6AP02538 CLDN5-201ENST00000403084 2357 ntBASIC21.49■■□□□ 1.03
KRT6AP02538 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT6AP02538 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT6AP02538 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT6AP02538 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT6AP02538 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT6AP02538 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
KRT6AP02538 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT6AP02538 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT6AP02538 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT6AP02538 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT6AP02538 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT6AP02538 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT6AP02538 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT6AP02538 FP325331.1-202ENST00000623531 1380 ntBASIC21.48■■□□□ 1.03
KRT6AP02538 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT6AP02538 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT6AP02538 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms