Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRDM1O75626 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRDM1O75626 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.41■■□□□ 1.82
PRDM1O75626 AL136967.2-201ENST00000623968 743 ntBASIC26.41■■□□□ 1.82
PRDM1O75626 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.41■■□□□ 1.82
PRDM1O75626 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRDM1O75626 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.41■■□□□ 1.82
PRDM1O75626 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRDM1O75626 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRDM1O75626 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRDM1O75626 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.4■■□□□ 1.82
PRDM1O75626 DUX4L4-201ENST00000566884 1269 ntBASIC26.4■■□□□ 1.82
PRDM1O75626 FP325331.1-202ENST00000623531 1380 ntBASIC26.4■■□□□ 1.82
PRDM1O75626 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRDM1O75626 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.4■■□□□ 1.82
PRDM1O75626 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.4■■□□□ 1.82
PRDM1O75626 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PRDM1O75626 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRDM1O75626 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.39■■□□□ 1.82
PRDM1O75626 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRDM1O75626 MIR939-201ENST00000401314 82 ntBASIC26.39■■□□□ 1.82
PRDM1O75626 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
PRDM1O75626 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.39■■□□□ 1.82
PRDM1O75626 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.39■■□□□ 1.82
PRDM1O75626 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PRDM1O75626 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PRDM1O75626 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
PRDM1O75626 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
PRDM1O75626 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.38■■□□□ 1.81
PRDM1O75626 AC008764.7-201ENST00000593779 1081 ntBASIC26.38■■□□□ 1.81
PRDM1O75626 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.38■■□□□ 1.81
PRDM1O75626 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PRDM1O75626 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.37■■□□□ 1.81
PRDM1O75626 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.37■■□□□ 1.81
PRDM1O75626 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.37■■□□□ 1.81
PRDM1O75626 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.37■■□□□ 1.81
PRDM1O75626 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRDM1O75626 AL353803.4-201ENST00000565882 1934 ntBASIC26.37■■□□□ 1.81
PRDM1O75626 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRDM1O75626 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRDM1O75626 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.37■■□□□ 1.81
PRDM1O75626 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRDM1O75626 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.36■■□□□ 1.81
PRDM1O75626 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRDM1O75626 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRDM1O75626 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRDM1O75626 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.36■■□□□ 1.81
PRDM1O75626 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.36■■□□□ 1.81
PRDM1O75626 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.36■■□□□ 1.81
PRDM1O75626 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
PRDM1O75626 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.36■■□□□ 1.81
PRDM1O75626 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRDM1O75626 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PRDM1O75626 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRDM1O75626 AC133637.1-201ENST00000624115 1537 ntBASIC26.35■■□□□ 1.81
PRDM1O75626 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PRDM1O75626 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.35■■□□□ 1.81
PRDM1O75626 ZNRF2P3-201ENST00000424200 374 ntBASIC26.35■■□□□ 1.81
PRDM1O75626 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
PRDM1O75626 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PRDM1O75626 AL499627.2-201ENST00000606283 725 ntBASIC26.35■■□□□ 1.81
PRDM1O75626 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
PRDM1O75626 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.35■■□□□ 1.81
PRDM1O75626 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
PRDM1O75626 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRDM1O75626 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRDM1O75626 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.34■■□□□ 1.81
PRDM1O75626 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.34■■□□□ 1.81
PRDM1O75626 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRDM1O75626 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRDM1O75626 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.34■■□□□ 1.81
PRDM1O75626 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRDM1O75626 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
PRDM1O75626 ANOS2P-203ENST00000472227 1816 ntBASIC26.34■■□□□ 1.81
PRDM1O75626 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRDM1O75626 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRDM1O75626 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRDM1O75626 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.33■■□□□ 1.81
PRDM1O75626 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRDM1O75626 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRDM1O75626 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.33■■□□□ 1.81
PRDM1O75626 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRDM1O75626 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRDM1O75626 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRDM1O75626 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRDM1O75626 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.33■■□□□ 1.81
PRDM1O75626 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.33■■□□□ 1.81
PRDM1O75626 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PRDM1O75626 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
PRDM1O75626 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PRDM1O75626 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRDM1O75626 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PRDM1O75626 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRDM1O75626 AC099791.1-201ENST00000416440 715 ntBASIC26.32■■□□□ 1.8
PRDM1O75626 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.32■■□□□ 1.8
PRDM1O75626 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.32■■□□□ 1.8
PRDM1O75626 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.32■■□□□ 1.8
PRDM1O75626 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRDM1O75626 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRDM1O75626 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms