Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.48■□□□□ 0.71
SMPD2O60906 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD2O60906 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD2O60906 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.48■□□□□ 0.71
SMPD2O60906 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD2O60906 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD2O60906 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD2O60906 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD2O60906 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SMPD2O60906 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.48■□□□□ 0.71
SMPD2O60906 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD2O60906 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD2O60906 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMPD2O60906 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD2O60906 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD2O60906 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD2O60906 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD2O60906 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD2O60906 AC009102.2-201ENST00000606772 1639 ntBASIC19.47■□□□□ 0.71
SMPD2O60906 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD2O60906 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMPD2O60906 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SMPD2O60906 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMPD2O60906 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.46■□□□□ 0.71
SMPD2O60906 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SMPD2O60906 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.46■□□□□ 0.71
SMPD2O60906 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.46■□□□□ 0.71
SMPD2O60906 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SMPD2O60906 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.46■□□□□ 0.71
SMPD2O60906 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.46■□□□□ 0.71
SMPD2O60906 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMPD2O60906 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMPD2O60906 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD2O60906 AC099791.1-201ENST00000416440 715 ntBASIC19.45■□□□□ 0.7
SMPD2O60906 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD2O60906 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.45■□□□□ 0.7
SMPD2O60906 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.45■□□□□ 0.7
SMPD2O60906 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD2O60906 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD2O60906 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMPD2O60906 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD2O60906 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMPD2O60906 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD2O60906 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD2O60906 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SMPD2O60906 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD2O60906 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD2O60906 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SMPD2O60906 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SMPD2O60906 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD2O60906 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMPD2O60906 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD2O60906 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SMPD2O60906 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.44■□□□□ 0.7
SMPD2O60906 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMPD2O60906 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD2O60906 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD2O60906 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD2O60906 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SMPD2O60906 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD2O60906 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD2O60906 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.43■□□□□ 0.7
SMPD2O60906 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD2O60906 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD2O60906 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD2O60906 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.43■□□□□ 0.7
SMPD2O60906 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMPD2O60906 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.42■□□□□ 0.7
SMPD2O60906 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMPD2O60906 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.42■□□□□ 0.7
SMPD2O60906 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.42■□□□□ 0.7
SMPD2O60906 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.42■□□□□ 0.7
SMPD2O60906 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD2O60906 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.41■□□□□ 0.7
SMPD2O60906 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
SMPD2O60906 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD2O60906 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.41■□□□□ 0.7
SMPD2O60906 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD2O60906 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms