Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.58■□□□□ 0.56
NDUFB3O43676 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.57■□□□□ 0.56
NDUFB3O43676 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFB3O43676 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.57■□□□□ 0.56
NDUFB3O43676 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFB3O43676 AC092068.2-201ENST00000590491 1708 ntBASIC18.57■□□□□ 0.56
NDUFB3O43676 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFB3O43676 SYT6-210ENST00000641643 1587 ntBASIC18.57■□□□□ 0.56
NDUFB3O43676 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NDUFB3O43676 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
NDUFB3O43676 DUX4L4-201ENST00000566884 1269 ntBASIC18.57■□□□□ 0.56
NDUFB3O43676 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.57■□□□□ 0.56
NDUFB3O43676 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NDUFB3O43676 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.57■□□□□ 0.56
NDUFB3O43676 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFB3O43676 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFB3O43676 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFB3O43676 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
NDUFB3O43676 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFB3O43676 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.56■□□□□ 0.56
NDUFB3O43676 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.56■□□□□ 0.56
NDUFB3O43676 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
NDUFB3O43676 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFB3O43676 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFB3O43676 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFB3O43676 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFB3O43676 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFB3O43676 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFB3O43676 AL353803.4-201ENST00000565882 1934 ntBASIC18.56■□□□□ 0.56
NDUFB3O43676 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFB3O43676 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFB3O43676 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFB3O43676 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NDUFB3O43676 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFB3O43676 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NDUFB3O43676 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.55■□□□□ 0.56
NDUFB3O43676 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.55■□□□□ 0.56
NDUFB3O43676 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NDUFB3O43676 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.55■□□□□ 0.56
NDUFB3O43676 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.55■□□□□ 0.56
NDUFB3O43676 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFB3O43676 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.55■□□□□ 0.56
NDUFB3O43676 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.54■□□□□ 0.56
NDUFB3O43676 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.54■□□□□ 0.56
NDUFB3O43676 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NDUFB3O43676 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.54■□□□□ 0.56
NDUFB3O43676 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.54■□□□□ 0.56
NDUFB3O43676 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFB3O43676 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
NDUFB3O43676 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NDUFB3O43676 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NDUFB3O43676 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NDUFB3O43676 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NDUFB3O43676 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.53■□□□□ 0.56
NDUFB3O43676 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NDUFB3O43676 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.53■□□□□ 0.56
NDUFB3O43676 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.53■□□□□ 0.56
NDUFB3O43676 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.53■□□□□ 0.56
NDUFB3O43676 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.53■□□□□ 0.56
NDUFB3O43676 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NDUFB3O43676 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NDUFB3O43676 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.53■□□□□ 0.56
NDUFB3O43676 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NDUFB3O43676 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.53■□□□□ 0.56
NDUFB3O43676 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDUFB3O43676 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.52■□□□□ 0.56
NDUFB3O43676 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFB3O43676 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.52■□□□□ 0.56
NDUFB3O43676 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFB3O43676 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFB3O43676 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFB3O43676 AC006455.2-201ENST00000429931 906 ntBASIC18.52■□□□□ 0.56
NDUFB3O43676 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
NDUFB3O43676 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms