Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
NCK2O43639 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.56■■□□□ 1.52
NCK2O43639 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.56■■□□□ 1.52
NCK2O43639 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.56■■□□□ 1.52
NCK2O43639 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NCK2O43639 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NCK2O43639 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NCK2O43639 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
NCK2O43639 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.55■■□□□ 1.52
NCK2O43639 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.55■■□□□ 1.52
NCK2O43639 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NCK2O43639 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.55■■□□□ 1.52
NCK2O43639 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.55■■□□□ 1.52
NCK2O43639 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.55■■□□□ 1.52
NCK2O43639 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.55■■□□□ 1.52
NCK2O43639 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NCK2O43639 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NCK2O43639 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NCK2O43639 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
NCK2O43639 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NCK2O43639 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.54■■□□□ 1.52
NCK2O43639 AC011298.3-201ENST00000615796 283 ntBASIC24.54■■□□□ 1.52
NCK2O43639 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NCK2O43639 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NCK2O43639 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NCK2O43639 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.53■■□□□ 1.52
NCK2O43639 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
NCK2O43639 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NCK2O43639 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.53■■□□□ 1.52
NCK2O43639 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
NCK2O43639 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
NCK2O43639 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NCK2O43639 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
NCK2O43639 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NCK2O43639 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.52■■□□□ 1.52
NCK2O43639 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.52■■□□□ 1.52
NCK2O43639 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.52■■□□□ 1.52
NCK2O43639 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.52■■□□□ 1.52
NCK2O43639 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
NCK2O43639 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.52■■□□□ 1.52
NCK2O43639 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
NCK2O43639 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NCK2O43639 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
NCK2O43639 SERBP1P1-201ENST00000396021 1160 ntBASIC24.51■■□□□ 1.51
NCK2O43639 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NCK2O43639 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.51■■□□□ 1.51
NCK2O43639 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.51■■□□□ 1.51
NCK2O43639 RARRES2P11-201ENST00000635158 484 ntBASIC24.51■■□□□ 1.51
NCK2O43639 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.51■■□□□ 1.51
NCK2O43639 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
NCK2O43639 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.5■■□□□ 1.51
NCK2O43639 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NCK2O43639 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NCK2O43639 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.5■■□□□ 1.51
NCK2O43639 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.5■■□□□ 1.51
NCK2O43639 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.5■■□□□ 1.51
NCK2O43639 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NCK2O43639 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NCK2O43639 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NCK2O43639 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.5■■□□□ 1.51
NCK2O43639 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.49■■□□□ 1.51
NCK2O43639 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCK2O43639 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCK2O43639 AC008764.7-201ENST00000593779 1081 ntBASIC24.49■■□□□ 1.51
NCK2O43639 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.49■■□□□ 1.51
NCK2O43639 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCK2O43639 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCK2O43639 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCK2O43639 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCK2O43639 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NCK2O43639 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCK2O43639 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.48■■□□□ 1.51
NCK2O43639 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCK2O43639 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.48■■□□□ 1.51
NCK2O43639 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
NCK2O43639 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.48■■□□□ 1.51
NCK2O43639 AC090192.1-201ENST00000517740 490 ntBASIC24.48■■□□□ 1.51
NCK2O43639 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCK2O43639 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.47■■□□□ 1.51
NCK2O43639 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.47■■□□□ 1.51
NCK2O43639 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCK2O43639 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NCK2O43639 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCK2O43639 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
NCK2O43639 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCK2O43639 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.47■■□□□ 1.51
NCK2O43639 AC079834.2-201ENST00000609776 1949 ntBASIC24.47■■□□□ 1.51
NCK2O43639 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCK2O43639 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NCK2O43639 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCK2O43639 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
NCK2O43639 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
NCK2O43639 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.46■■□□□ 1.51
NCK2O43639 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.46■■□□□ 1.51
NCK2O43639 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.46■■□□□ 1.51
NCK2O43639 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.46■■□□□ 1.51
NCK2O43639 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.46■■□□□ 1.51
NCK2O43639 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NCK2O43639 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.45■■□□□ 1.51
NCK2O43639 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms