Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXS1O43638 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXS1O43638 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXS1O43638 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXS1O43638 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXS1O43638 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXS1O43638 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
FOXS1O43638 AC136469.2-201ENST00000623944 1028 ntBASIC21.12■□□□□ 0.97
FOXS1O43638 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXS1O43638 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXS1O43638 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXS1O43638 AL353803.4-201ENST00000565882 1934 ntBASIC21.12■□□□□ 0.97
FOXS1O43638 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXS1O43638 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.11■□□□□ 0.97
FOXS1O43638 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXS1O43638 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
FOXS1O43638 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXS1O43638 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
FOXS1O43638 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXS1O43638 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXS1O43638 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXS1O43638 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXS1O43638 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXS1O43638 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXS1O43638 SUDS3P1-201ENST00000505831 966 ntBASIC21.1■□□□□ 0.97
FOXS1O43638 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXS1O43638 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.1■□□□□ 0.97
FOXS1O43638 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXS1O43638 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXS1O43638 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXS1O43638 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXS1O43638 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FOXS1O43638 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXS1O43638 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXS1O43638 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXS1O43638 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXS1O43638 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXS1O43638 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
FOXS1O43638 AL355001.2-201ENST00000620617 1191 ntBASIC21.09■□□□□ 0.97
FOXS1O43638 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXS1O43638 AC092068.2-201ENST00000590491 1708 ntBASIC21.09■□□□□ 0.97
FOXS1O43638 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXS1O43638 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXS1O43638 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXS1O43638 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXS1O43638 AC019069.1-201ENST00000610008 1333 ntBASIC21.08■□□□□ 0.97
FOXS1O43638 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXS1O43638 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXS1O43638 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXS1O43638 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXS1O43638 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXS1O43638 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXS1O43638 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXS1O43638 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.08■□□□□ 0.97
FOXS1O43638 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.08■□□□□ 0.96
FOXS1O43638 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXS1O43638 AC133637.1-201ENST00000624115 1537 ntBASIC21.08■□□□□ 0.96
FOXS1O43638 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.08■□□□□ 0.96
FOXS1O43638 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
FOXS1O43638 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
FOXS1O43638 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXS1O43638 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXS1O43638 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXS1O43638 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXS1O43638 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXS1O43638 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.07■□□□□ 0.96
FOXS1O43638 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXS1O43638 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXS1O43638 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FOXS1O43638 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXS1O43638 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FOXS1O43638 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXS1O43638 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
FOXS1O43638 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.06■□□□□ 0.96
FOXS1O43638 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.06■□□□□ 0.96
FOXS1O43638 AP001330.3-201ENST00000520123 633 ntBASIC21.06■□□□□ 0.96
FOXS1O43638 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXS1O43638 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXS1O43638 AL136967.2-201ENST00000623968 743 ntBASIC21.06■□□□□ 0.96
FOXS1O43638 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXS1O43638 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXS1O43638 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXS1O43638 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXS1O43638 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXS1O43638 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXS1O43638 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXS1O43638 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
FOXS1O43638 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXS1O43638 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.05■□□□□ 0.96
FOXS1O43638 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
FOXS1O43638 AF213884.3-201ENST00000563833 479 ntBASIC21.05■□□□□ 0.96
FOXS1O43638 AC142381.2-201ENST00000566120 298 ntBASIC21.05■□□□□ 0.96
FOXS1O43638 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXS1O43638 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
FOXS1O43638 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXS1O43638 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXS1O43638 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXS1O43638 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXS1O43638 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXS1O43638 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms