Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPC1O15118 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPC1O15118 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
NPC1O15118 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPC1O15118 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NPC1O15118 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPC1O15118 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.63■■□□□ 1.21
NPC1O15118 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NPC1O15118 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPC1O15118 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.62■■□□□ 1.21
NPC1O15118 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.62■■□□□ 1.21
NPC1O15118 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NPC1O15118 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPC1O15118 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPC1O15118 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPC1O15118 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.62■■□□□ 1.21
NPC1O15118 MIR572-201ENST00000384983 95 ntBASIC22.62■■□□□ 1.21
NPC1O15118 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.62■■□□□ 1.21
NPC1O15118 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPC1O15118 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.62■■□□□ 1.21
NPC1O15118 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.62■■□□□ 1.21
NPC1O15118 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
NPC1O15118 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
NPC1O15118 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.61■■□□□ 1.21
NPC1O15118 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.61■■□□□ 1.21
NPC1O15118 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 YBX1P1-201ENST00000445822 960 ntBASIC22.61■■□□□ 1.21
NPC1O15118 AP005435.1-201ENST00000529293 1178 ntBASIC22.61■■□□□ 1.21
NPC1O15118 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NPC1O15118 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.6■■□□□ 1.21
NPC1O15118 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPC1O15118 AL162430.1-201ENST00000480705 870 ntBASIC22.6■■□□□ 1.21
NPC1O15118 AL354811.1-201ENST00000610286 706 ntBASIC22.6■■□□□ 1.21
NPC1O15118 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.6■■□□□ 1.21
NPC1O15118 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPC1O15118 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
NPC1O15118 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
NPC1O15118 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.6■■□□□ 1.21
NPC1O15118 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.59■■□□□ 1.21
NPC1O15118 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
NPC1O15118 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 LINC00543-201ENST00000567234 1845 ntBASIC22.59■■□□□ 1.21
NPC1O15118 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.59■■□□□ 1.21
NPC1O15118 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 AC027612.3-201ENST00000413684 1047 ntBASIC22.59■■□□□ 1.21
NPC1O15118 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.59■■□□□ 1.21
NPC1O15118 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.59■■□□□ 1.21
NPC1O15118 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.59■■□□□ 1.21
NPC1O15118 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPC1O15118 LINC01124-201ENST00000409786 2117 ntBASIC22.58■■□□□ 1.21
NPC1O15118 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
NPC1O15118 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.58■■□□□ 1.21
NPC1O15118 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NPC1O15118 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
NPC1O15118 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.58■■□□□ 1.21
NPC1O15118 AC034268.1-201ENST00000441047 882 ntBASIC22.58■■□□□ 1.21
NPC1O15118 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.58■■□□□ 1.21
NPC1O15118 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.58■■□□□ 1.21
NPC1O15118 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NPC1O15118 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
NPC1O15118 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.2
NPC1O15118 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 AC123595.1-201ENST00000440769 1046 ntBASIC22.57■■□□□ 1.2
NPC1O15118 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
NPC1O15118 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
NPC1O15118 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.57■■□□□ 1.2
NPC1O15118 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPC1O15118 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.56■■□□□ 1.2
NPC1O15118 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NPC1O15118 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.56■■□□□ 1.2
NPC1O15118 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
NPC1O15118 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NPC1O15118 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NPC1O15118 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.56■■□□□ 1.2
NPC1O15118 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms