Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.12■□□□□ 0.33
NDUFA4O00483 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFA4O00483 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA4O00483 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFA4O00483 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NDUFA4O00483 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA4O00483 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.1■□□□□ 0.33
NDUFA4O00483 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.1■□□□□ 0.33
NDUFA4O00483 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NDUFA4O00483 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.1■□□□□ 0.33
NDUFA4O00483 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 AC012676.1-201ENST00000574705 1949 ntBASIC17.1■□□□□ 0.33
NDUFA4O00483 AC068473.5-201ENST00000616428 2072 ntBASIC17.1■□□□□ 0.33
NDUFA4O00483 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 AC009086.3-201ENST00000623486 1008 ntBASIC17.1■□□□□ 0.33
NDUFA4O00483 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NDUFA4O00483 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA4O00483 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.1■□□□□ 0.33
NDUFA4O00483 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA4O00483 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA4O00483 AC241377.3-202ENST00000626088 1088 ntBASIC17.09■□□□□ 0.33
NDUFA4O00483 AC241585.3-202ENST00000628937 1088 ntBASIC17.09■□□□□ 0.33
NDUFA4O00483 AC245100.8-202ENST00000629247 1058 ntBASIC17.09■□□□□ 0.33
NDUFA4O00483 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFA4O00483 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NDUFA4O00483 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.09■□□□□ 0.33
NDUFA4O00483 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA4O00483 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA4O00483 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFA4O00483 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA4O00483 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA4O00483 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.08■□□□□ 0.33
NDUFA4O00483 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFA4O00483 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NDUFA4O00483 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.08■□□□□ 0.32
NDUFA4O00483 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA4O00483 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.08■□□□□ 0.32
NDUFA4O00483 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA4O00483 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA4O00483 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA4O00483 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA4O00483 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFA4O00483 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFA4O00483 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NDUFA4O00483 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.07■□□□□ 0.32
NDUFA4O00483 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFA4O00483 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NDUFA4O00483 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFA4O00483 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NDUFA4O00483 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.07■□□□□ 0.32
NDUFA4O00483 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA4O00483 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFA4O00483 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NDUFA4O00483 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFA4O00483 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.06■□□□□ 0.32
NDUFA4O00483 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NDUFA4O00483 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.06■□□□□ 0.32
NDUFA4O00483 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFA4O00483 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.06■□□□□ 0.32
NDUFA4O00483 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.06■□□□□ 0.32
NDUFA4O00483 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFA4O00483 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NDUFA4O00483 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFA4O00483 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
NDUFA4O00483 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
NDUFA4O00483 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFA4O00483 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NDUFA4O00483 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFA4O00483 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.05■□□□□ 0.32
NDUFA4O00483 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.05■□□□□ 0.32
NDUFA4O00483 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms